Factsheet for Bra011194.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
endoplasmic reticulum 2
golgi 3
extracellular 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi, plastid
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28188	Canola	cytosol, endoplasmic reticulum, golgi, plastid	99.77	99.77
CDY70926	Canola	cytosol, endoplasmic reticulum, golgi, plastid	99.77	99.77
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	98.6	98.6
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	96.04	95.81
KRH02967	Soybean	nucleus	88.81	88.4
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	88.11	87.7
PGSC0003DMT400029181	Potato	cytosol, golgi, peroxisome	84.85	85.65
Solyc07g006220.1.1	Tomato	nucleus	84.15	84.94
PGSC0003DMT400020223	Potato	endoplasmic reticulum	82.75	82.37
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	76.46	81.19
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	78.32	81.16
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	81.35	80.79
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	82.05	80.55
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	80.89	79.04
Zm00001d018350_P001	Maize	plasma membrane	80.89	79.04
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	76.46	79.04
TraesCS6D01G335600.1	Wheat	plastid	80.42	78.77
TraesCS6B01G385900.1	Wheat	plastid	80.42	78.77
TraesCS6A01G353200.1	Wheat	plastid	80.42	78.77
HORVU5Hr1G060660.3	Barley	mitochondrion	71.79	78.37
Os06t0187200-01	Rice	golgi, peroxisome	55.94	77.67
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	72.73	77.04
TraesCS7D01G154100.1	Wheat	golgi	77.39	76.67
Zm00001d045078_P001	Maize	extracellular, golgi	73.43	76.27
OQU75981	Sorghum	endoplasmic reticulum	77.86	75.91
Zm00001d037087_P001	Maize	endoplasmic reticulum	77.86	75.91
TraesCS7A01G152300.1	Wheat	endoplasmic reticulum	77.62	75.17
TraesCS7B01G056200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	77.62	75.17
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	70.16	70.0
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	67.83	66.9
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	65.5	65.5
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	66.2	65.29
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	58.28	64.94
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	72.96	61.25
Bra014987.1-P	Field mustard	endoplasmic reticulum	64.34	60.79
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	64.34	60.0
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	63.64	59.87
Bra016757.1-P	Field mustard	cytosol	21.91	26.78
Bra019785.1-P	Field mustard	cytosol	20.28	25.97
Bra027732.1-P	Field mustard	golgi	20.51	25.66
Bra035262.1-P	Field mustard	golgi	20.75	25.65
Bra013744.1-P	Field mustard	cytosol, golgi	20.75	25.57
Bra027626.1-P	Field mustard	cytosol	20.75	25.36
Bra039253.1-P	Field mustard	cytosol	20.28	25.07
Bra019257.1-P	Field mustard	plastid	20.28	25.0
Bra032409.1-P	Field mustard	mitochondrion	21.68	22.2
Bra033746.1-P	Field mustard	golgi	20.51	21.36
Bra020917.1-P	Field mustard	golgi, mitochondrion	20.28	21.17
Bra027557.1-P	Field mustard	golgi	19.81	20.63
Bra030933.1-P	Field mustard	cytosol	8.62	20.0
Bra005387.1-P	Field mustard	golgi, mitochondrion	20.05	18.94
Bra013466.1-P	Field mustard	mitochondrion	20.28	18.79
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.75	13.38
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.51	13.17
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.28	13.08
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	20.28	12.95
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	20.05	12.84
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	19.11	12.73
Bra019776.1-P	Field mustard	cytosol	3.03	4.05
Bra027005.1-P	Field mustard	cytosol	2.8	4.04

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra011194	EnsemblPlants:Bra011194.1	EnsemblPlants:Bra011194.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	UniProt:M4D3Z0	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
InterPro:Nuc_sugar_epim	PFAM:PF16363	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF17	SUPFAM:SSF51735
TMHMM:TMhelix	UniParc:UPI0002546D9E	SEG:seg	:	:	:

Description

AT4G30440 (E=4e-229) GAE1 | GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1); UDP-glucuronate 4-epimerase/ catalytic

Coordinates

chrA01:+:3391956..3393245

Molecular Weight (calculated)

47478.7 Da

IEP (calculated)

10.035

GRAVY (calculated)

-0.209

Length

429 amino acids

Sequence
(BLAST)

001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLETC
201: KSANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGSAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNCVEMPGNG DVPFTHANIS SARKEFGYKP
401: TTDLETGLRK FVRWYLSYYG YNTKAKLVH

Best Arabidopsis Sequence Match ( AT4G30440.1 )
(BLAST)

001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH

Arabidopsis Description

GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.