Factsheet for Bra027626.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47346	Canola	cytosol	99.15	99.15
CDY49193	Canola	cytosol	98.86	98.86
AT1G63180.1	Thale cress	cytosol	93.73	93.73
Bra039253.1-P	Field mustard	cytosol	91.17	92.22
Bra016757.1-P	Field mustard	cytosol	90.03	90.03
Bra019785.1-P	Field mustard	cytosol	82.91	86.87
VIT_02s0025g04210.t01	Wine grape	cytosol	83.19	83.43
KRH59827	Soybean	extracellular, golgi	82.91	83.14
KRH41129	Soybean	nucleus	82.62	82.86
Solyc08g080570.2.1	Tomato	cytosol	77.78	77.78
PGSC0003DMT400007898	Potato	cytosol	77.49	77.49
GSMUA_Achr1P18740_001	Banana	cytosol	77.21	76.55
GSMUA_Achr5P13620_001	Banana	cytosol	75.5	75.5
KXG36042	Sorghum	cytosol	70.94	68.41
Zm00001d021249_P003	Maize	cytosol	69.8	67.49
TraesCS5B01G315700.1	Wheat	cytosol	69.8	66.58
TraesCS5A01G314800.1	Wheat	cytosol	69.52	66.3
TraesCS5D01G321100.1	Wheat	cytosol	69.23	65.85
Bra019257.1-P	Field mustard	plastid	64.67	65.23
Bra013744.1-P	Field mustard	cytosol, golgi	64.39	64.94
Bra027732.1-P	Field mustard	golgi	63.25	64.72
Bra035262.1-P	Field mustard	golgi	63.82	64.55
Os09t0526700-01	Rice	cytosol	66.1	62.2
HORVU5Hr1G080860.10	Barley	mitochondrion	69.52	57.55
Bra027557.1-P	Field mustard	golgi	37.89	32.28
Bra032409.1-P	Field mustard	mitochondrion	38.46	32.22
Bra033746.1-P	Field mustard	golgi	37.61	32.04
Bra020917.1-P	Field mustard	golgi, mitochondrion	37.04	31.63
Bra005387.1-P	Field mustard	golgi, mitochondrion	37.61	29.07
Bra013466.1-P	Field mustard	mitochondrion	37.61	28.51
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	27.07	22.14
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	26.5	21.38
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	25.93	21.16
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.36	20.75
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.64	20.69
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	27.07	20.65
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	26.5	20.39
Bra014987.1-P	Field mustard	endoplasmic reticulum	26.21	20.26
Bra030933.1-P	Field mustard	cytosol	10.54	20.0
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	23.93	19.53
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	24.5	12.8
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	24.22	12.69
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.36	12.33
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.36	12.28
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.08	12.18
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	21.94	11.96
Bra027005.1-P	Field mustard	cytosol	3.99	4.71
Bra019776.1-P	Field mustard	cytosol	3.7	4.05

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra027626
EnsemblPlants:Bra027626.1	EnsemblPlants:Bra027626.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975
GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	UniProt:M4EFR3	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF9	SUPFAM:SSF51735	TIGRFAMs:TIGR01179
InterPro:UDP_G4E	UniParc:UPI0002542487	:	:	:	:

Description

AT1G63180 (E=6e-196) UGE3 | UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3); UDP-glucose 4-epimerase/ protein dimerization

Coordinates

chrA09:+:7293119..7295060

Molecular Weight (calculated)

38925.4 Da

IEP (calculated)

6.053

GRAVY (calculated)

-0.291

Length

351 amino acids

Sequence
(BLAST)

001: MGSSVEQCIL VTGGAGFIGT HTVVQLLNQG FKVSIIDNLD NSVHEAVHRV RELVGPDLSS KLEFNLGDLR NKGDIEKLFS NQRFDAVIHF AGLKAVGESV
101: ANPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEVVPCVEDF DLQAMNPYGR TKLYLEEIAR DIQAAEPEWR IILLRYFNPV GAHESGRIGD
201: DPKGISNNLM PYIQQVAVGR LPELNVFGHD YPTPDGSAVR DYIHVMDLAD GHVAALNKLF TDPKIGCTAY NLGTGQGTSV LEMVSAFEKA SGKKIPMKLC
301: PRRAGDATAV YASTERAEKE LGWKAKYGVD EMCRDQWNWA NNNPWGFHEK P

Best Arabidopsis Sequence Match ( AT1G63180.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLNQG FKVTIIDNLD NSVVEAVHRV RELVGPDLST KLEFNLGDLR NKGDIEKLFS NQRFDAVIHF AGLKAVGESV
101: GNPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEIVPCVEDF ELQAMNPYGR TKLFLEEIAR DIHAAEPEWK IILLRYFNPV GAHESGRIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVFGHD YPTMDGSAVR DYIHVMDLAD GHVAALNKLF SDSKIGCTAY NLGTGQGTSV LEMVSSFEKA SGKKIPIKLC
301: PRRAGDATAV YASTQKAEKE LGWKAKYGVD EMCRDQWNWA NKNPWGFQKK P

Arabidopsis Description

UGE3UGE3 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.