Factsheet for Solyc08g080570.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc08g080570.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12780.1	Solyc08g080570.2.1	AT1G12780.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007898	Potato	cytosol	98.29	98.29
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	80.34	80.34
KRH41129	Soybean	nucleus	79.49	79.71
VIT_02s0025g04210.t01	Wine grape	cytosol	79.49	79.71
Bra016757.1-P	Field mustard	cytosol	79.2	79.2
CDY21065	Canola	cytosol	79.2	79.2
CDY31278	Canola	cytosol	79.2	79.2
KRH59827	Soybean	extracellular, golgi	78.92	79.14
AT1G63180.1	Thale cress	cytosol	78.92	78.92
CDY47346	Canola	cytosol	78.63	78.63
CDY49193	Canola	cytosol	78.35	78.35
Bra027626.1-P	Field mustard	cytosol	77.78	77.78
GSMUA_Achr1P18740_001	Banana	cytosol	77.78	77.12
CDY69000	Canola	cytosol	72.36	75.82
GSMUA_Achr5P13620_001	Banana	cytosol	75.78	75.78
Bra019785.1-P	Field mustard	cytosol	72.08	75.52
Bra039253.1-P	Field mustard	cytosol	74.07	74.93
Zm00001d021249_P003	Maize	cytosol	70.66	68.32
KXG36042	Sorghum	cytosol	70.37	67.86
Solyc08g082440.2.1	Tomato	cytosol, golgi	66.38	66.38
TraesCS5B01G315700.1	Wheat	cytosol	69.23	66.03
TraesCS5A01G314800.1	Wheat	cytosol	69.23	66.03
TraesCS5D01G321100.1	Wheat	cytosol	68.95	65.58
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	62.96	63.51
Os09t0526700-01	Rice	cytosol	66.95	63.0
HORVU5Hr1G080860.10	Barley	mitochondrion	68.95	57.08
CDY60264	Canola	plastid	79.2	45.5
Solyc07g043550.2.1	Tomato	cytosol, unclear	33.05	38.41
Solyc12g006410.1.1	Tomato	unclear	39.03	34.34
Solyc02g030230.2.1	Tomato	mitochondrion	37.89	31.97
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	37.89	31.89
Solyc03g083550.1.1	Tomato	golgi	25.93	22.41
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	27.35	22.22
Solyc07g006220.1.1	Tomato	nucleus	26.78	22.12
Solyc05g053790.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	26.78	21.71
Solyc08g079440.1.1	Tomato	nucleus	27.35	21.57
Solyc09g092330.1.1	Tomato	nucleus	27.35	21.24
Solyc01g091200.2.1	Tomato	nucleus	25.93	20.92
Solyc10g018260.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	25.64	20.69
Solyc05g050990.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion	25.64	20.69
Solyc08g069110.2.1	Tomato	unclear	23.93	12.9
Solyc07g062130.2.1	Tomato	extracellular, unclear	22.79	11.87
Solyc10g007480.2.1	Tomato	nucleus	17.95	10.68
Solyc08g080140.2.1	Tomato	extracellular	3.7	4.32

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152
GO:GO:0016853	UniProt:K4CP57	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725
PANTHER:PTHR43725:SF9	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc08g080570.2	EnsemblPlants:Solyc08g080570.2.1	TIGRFAMs:TIGR01179	InterPro:UDP_G4E
UniParc:UPI000276BADC	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:63829122..63832260

Molecular Weight (calculated)

39212.2 Da

IEP (calculated)

7.847

GRAVY (calculated)

-0.297

Length

351 amino acids

Sequence
(BLAST)

001: MGVQCQENIL VTGGAGFIGT HTVVQLLNEG FKVTIIDNFH NSVKEAVDRV RELVGPQLSQ NLEFHLGDIR NRDDLEKLFS KKEFAAVVHF AGLKAVGESV
101: VQPFLYFENN LIGSITLYSV MAKYNCKKLV FSSSATVYGQ PEKVPCVEDF ELKAMNPYGR TKLFLEDIAR DIQKADQEWN IILLRYFNPV GAHESGKLGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGND YPTPDGTAIR DYIHVMDLAD GHVVALQRLL RQNHIGCVAY NLGTGKGKSV LEMVGAFEKA SGKKIPLKMC
301: PRRPGDATAV YASTEKAEKE LGWKAKYGIN EMCRDQWKWA SQNPWGYQPK P

Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L

Arabidopsis Description

UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.