Factsheet for Bra039253.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027626.1-P	Field mustard	cytosol	92.22	91.17
AT1G63180.1	Thale cress	cytosol	90.2	89.17
Bra016757.1-P	Field mustard	cytosol	87.03	86.04
Bra019785.1-P	Field mustard	cytosol	81.27	84.18
VIT_02s0025g04210.t01	Wine grape	cytosol	79.54	78.86
KRH59827	Soybean	extracellular, golgi	79.25	78.57
KRH41129	Soybean	nucleus	78.96	78.29
Solyc08g080570.2.1	Tomato	cytosol	74.93	74.07
PGSC0003DMT400007898	Potato	cytosol	74.64	73.79
GSMUA_Achr1P18740_001	Banana	cytosol	74.64	73.16
GSMUA_Achr5P13620_001	Banana	cytosol	72.91	72.08
KXG36042	Sorghum	cytosol	69.74	66.48
Zm00001d021249_P003	Maize	cytosol	68.88	65.84
TraesCS5B01G315700.1	Wheat	cytosol	68.01	64.13
TraesCS5A01G314800.1	Wheat	cytosol	67.72	63.86
Bra019257.1-P	Field mustard	plastid	63.69	63.51
TraesCS5D01G321100.1	Wheat	cytosol	67.44	63.41
Bra013744.1-P	Field mustard	cytosol, golgi	63.11	62.93
Bra035262.1-P	Field mustard	golgi	62.82	62.82
Bra027732.1-P	Field mustard	golgi	61.96	62.68
Os09t0526700-01	Rice	cytosol	64.84	60.32
HORVU5Hr1G080860.10	Barley	mitochondrion	67.72	55.42
Bra027557.1-P	Field mustard	golgi	37.18	31.31
Bra032409.1-P	Field mustard	mitochondrion	37.18	30.79
Bra033746.1-P	Field mustard	golgi	36.31	30.58
Bra020917.1-P	Field mustard	golgi, mitochondrion	36.02	30.41
Bra005387.1-P	Field mustard	golgi, mitochondrion	36.02	27.53
Bra013466.1-P	Field mustard	mitochondrion	36.6	27.43
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	26.22	21.21
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	25.94	20.93
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.07	20.28
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	25.36	20.23
Bra030933.1-P	Field mustard	cytosol	10.66	20.0
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	26.51	20.0
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.07	20.0
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	25.94	19.74
Bra014987.1-P	Field mustard	endoplasmic reticulum	25.65	19.6
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	23.34	18.84
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	24.21	12.5
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	23.92	12.39
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.05	12.03
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.05	11.98
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	22.77	11.88
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	21.61	11.65
Bra027005.1-P	Field mustard	cytosol	3.75	4.38
Bra019776.1-P	Field mustard	cytosol	3.46	3.74

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra039253
EnsemblPlants:Bra039253.1	EnsemblPlants:Bra039253.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975
GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	UniProt:M4FDT2	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF9	SUPFAM:SSF51735	TIGRFAMs:TIGR01179
InterPro:UDP_G4E	UniParc:UPI000253E84D	:	:	:	:

Description

AT1G63180 (E=2e-186) UGE3 | UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3); UDP-glucose 4-epimerase/ protein dimerization

Coordinates

chrScaffold000162:+:199797..201694

Molecular Weight (calculated)

38682.3 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.255

Length

347 amino acids

Sequence
(BLAST)

001: MGSSVEQCIL VTGGAGFIGT HTVVQLLNKG FKVSIIDNLD NSVLEAVHRV RELVGPDLST KLEFNLGDLR NKGDIEKLFS NQRFDAVIHF AGLKAMSESV
101: ANPCRCFDNN LVGTINLYET MAKYNCKIIV FSSSATVYGK PEVVPCVEDF ELEAMNPYGR TMLYLEEIAR DIHAAEPEWR IVLLRYFNPV GAHESGRIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVFGHD YPTKDGSAVR DYIHVMDLAD GHVAALNKLF TDPKIGCTAY NLGSGQGTSV LEMVTAFEKA SGKKIPMKQY
301: PRRAEDATAV YASTKRAEKE LGWKAQYRMD EMCRDQWNWA NNNPWGF

Best Arabidopsis Sequence Match ( AT1G63180.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLNQG FKVTIIDNLD NSVVEAVHRV RELVGPDLST KLEFNLGDLR NKGDIEKLFS NQRFDAVIHF AGLKAVGESV
101: GNPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEIVPCVEDF ELQAMNPYGR TKLFLEEIAR DIHAAEPEWK IILLRYFNPV GAHESGRIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVFGHD YPTMDGSAVR DYIHVMDLAD GHVAALNKLF SDSKIGCTAY NLGTGQGTSV LEMVSSFEKA SGKKIPIKLC
301: PRRAGDATAV YASTQKAEKE LGWKAKYGVD EMCRDQWNWA NKNPWGFQKK P

Arabidopsis Description

UGE3UGE3 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.