Factsheet for Bra027557.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
cytosol 1
golgi 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13102	Canola	golgi	99.03	99.03
CDY29113	Canola	golgi	98.54	98.54
Bra033746.1-P	Field mustard	golgi	93.45	93.45
AT5G44480.1	Thale cress	mitochondrion	93.93	88.76
Bra020917.1-P	Field mustard	golgi, mitochondrion	82.52	82.73
Bra032409.1-P	Field mustard	mitochondrion	80.1	78.76
Os04t0618200-02	Rice	golgi	74.51	78.52
PGSC0003DMT400080637	Potato	golgi	75.73	78.0
KRH43065	Soybean	golgi, mitochondrion, plastid	78.4	77.64
KRH36892	Soybean	golgi, mitochondrion	78.16	77.59
KRH11871	Soybean	golgi, plastid	78.16	77.59
KRH59194	Soybean	golgi, mitochondrion	78.16	77.4
Solyc02g030230.2.1	Tomato	mitochondrion	77.91	77.16
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	77.67	76.74
GSMUA_Achr11P...	Banana	cytosol, golgi	72.57	76.47
EER95001	Sorghum	mitochondrion	75.49	76.41
PGSC0003DMT400054459	Potato	mitochondrion	76.94	76.02
Os08t0129700-01	Rice	mitochondrion	74.76	75.86
GSMUA_Achr11P...	Banana	mitochondrion	76.7	75.78
GSMUA_Achr3P23390_001	Banana	mitochondrion	76.7	75.78
GSMUA_Achr8P33320_001	Banana	mitochondrion	76.46	75.54
KXG27129	Sorghum	mitochondrion, plastid	75.24	74.7
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	73.06	74.32
HORVU7Hr1G074300.2	Barley	golgi	73.06	74.32
TraesCS7A01G311100.1	Wheat	golgi	72.82	74.07
TraesCS2A01G460400.1	Wheat	unclear	74.03	74.03
TraesCS2B01G482000.1	Wheat	golgi	74.03	74.03
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	73.79	73.79
Os07t0139400-01	Rice	plasma membrane	75.24	73.63
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	73.54	73.54
TraesCS5D01G298700.1	Wheat	mitochondrion	75.0	73.4
TraesCS5A01G291300.1	Wheat	golgi	75.0	73.4
GSMUA_Achr4P31860_001	Banana	mitochondrion	74.03	73.32
Bra013466.1-P	Field mustard	mitochondrion	82.28	73.22
HORVU5Hr1G077110.3	Barley	mitochondrion	74.76	73.16
TraesCS5B01G290300.1	Wheat	mitochondrion	74.76	73.16
TraesCS7B01G210700.2	Wheat	golgi	73.06	72.88
EER95854	Sorghum	mitochondrion, plastid	75.0	71.86
Bra005387.1-P	Field mustard	golgi, mitochondrion	78.4	71.15
Bra027732.1-P	Field mustard	golgi	35.19	42.27
Bra035262.1-P	Field mustard	golgi	35.44	42.07
Bra019257.1-P	Field mustard	plastid	35.44	41.95
Bra013744.1-P	Field mustard	cytosol, golgi	35.44	41.95
Bra019785.1-P	Field mustard	cytosol	32.52	40.0
Bra016757.1-P	Field mustard	cytosol	33.25	39.03
Zm00001d017999_P002	Maize	mitochondrion	29.13	38.59
Bra027626.1-P	Field mustard	cytosol	32.28	37.89
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	31.55	37.57
Bra039253.1-P	Field mustard	cytosol	31.31	37.18
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	23.06	22.14
Bra030933.1-P	Field mustard	cytosol	9.71	21.62
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	22.09	21.16
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	22.09	20.92
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	22.82	20.61
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	21.12	20.23
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	22.57	20.22
Bra014987.1-P	Field mustard	endoplasmic reticulum	22.09	20.04
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	20.63	19.81
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	20.63	19.54
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.12	13.08
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.87	12.93
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	20.87	12.84
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.63	12.72
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	20.39	12.5
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	18.93	12.11
Bra019776.1-P	Field mustard	cytosol	3.4	4.36
Bra027005.1-P	Field mustard	cytosol	2.67	3.7

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra027557
EnsemblPlants:Bra027557.1	EnsemblPlants:Bra027557.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575
GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016853	UniProt:M4EFJ5	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349
PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	TMHMM:TMhelix	InterPro:UDP_G4E	UniParc:UPI0002542760
SEG:seg	:	:	:	:	:

Description

AT5G44480 (E=2e-201) DUR | DUR (DEFECTIVE UGE IN ROOT); UDP-glucose 4-epimerase/ binding / catalytic/ coenzyme binding

Coordinates

chrA09:-:13341054..13343119

Molecular Weight (calculated)

45587.9 Da

IEP (calculated)

9.421

GRAVY (calculated)

-0.209

Length

412 amino acids

Sequence
(BLAST)

001: MLTLFGVRNQ RRSSRPLSVG DMDYLEPKTK NNLLGKLLLL ASLVILAIIV ISRSSSFTSP SVFSQREEGV THVLVTGGAG YIGSHAALRL LKDSYRVTIV
101: DNLSRGNLGA VKVLQGLFPQ TGRLQFIYAD LGDPAAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISDACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL QKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGAEIKVDF LPRRPGDYAE VYSDPTKILR DLNWTAQYTN LQNSLQVAWR
401: WQKIHPHGYA SY

Best Arabidopsis Sequence Match ( AT5G44480.3 )
(BLAST)

001: MLNSSGVRTQ RRSPRPLSLG EMDCLEPKTK NNLTGKLLLV ASLLILAIIV ISQSSSFTSP SAFSQREEGV THVLVTGGAG YIGSHAALRL LRDSYRVTIV
101: DNLSRGNLGA VKTLQQLFPQ TGRLQFIYAD LGDPLAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL EKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDF LPRRPGDYAE VYSDPTKILK DLNWTARFTN LQDSLQVAWR
401: WQKIHPHGYN SY

Arabidopsis Description

DURPutative UDP-arabinose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI17]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.