Factsheet for TraesCS5B01G290300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G291300.1	Wheat	golgi	99.29	99.29
TraesCS5D01G298700.1	Wheat	mitochondrion	98.81	98.81
HORVU5Hr1G077110.3	Barley	mitochondrion	97.86	97.86
Os07t0139400-01	Rice	plasma membrane	89.55	89.55
EER95854	Sorghum	mitochondrion, plastid	87.65	85.81
CDY71965	Canola	cytosol, mitochondrion	46.56	82.35
AT2G34850.2	Thale cress	cytosol	45.84	81.78
Solyc07g043550.2.1	Tomato	cytosol, unclear	58.19	81.13
GSMUA_Achr4P31860_001	Banana	mitochondrion	78.62	79.57
VIT_10s0003g05640.t01	Wine grape	golgi	78.38	78.95
TraesCS2B01G482000.1	Wheat	golgi	76.01	77.67
AT4G20460.1	Thale cress	golgi, mitochondrion	75.77	77.62
CDX78998	Canola	mitochondrion	75.53	77.37
PGSC0003DMT400080637	Potato	golgi	73.4	77.25
CDX82768	Canola	mitochondrion	75.3	77.13
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	75.77	76.5
CDY09555	Canola	mitochondrion	76.25	76.43
CDY52524	Canola	golgi	76.96	76.42
AT1G30620.4	Thale cress	golgi, mitochondrion	76.01	76.37
CDY31644	Canola	golgi	76.72	76.18
Bra032409.1-P	Field mustard	mitochondrion	75.77	76.13
TraesCS7B01G210700.2	Wheat	golgi	74.58	76.03
CDY02312	Canola	mitochondrion	75.77	75.95
KRH36892	Soybean	golgi, mitochondrion	74.82	75.9
PGSC0003DMT400054459	Potato	mitochondrion	75.06	75.78
PGSC0003DMT400041159	Potato	golgi, mitochondrion	69.83	75.77
KRH59194	Soybean	golgi, mitochondrion	74.82	75.72
Solyc02g030230.2.1	Tomato	mitochondrion	74.82	75.72
Bra020917.1-P	Field mustard	golgi, mitochondrion	73.87	75.67
KRH11871	Soybean	golgi, plastid	74.35	75.42
KRH43065	Soybean	golgi, mitochondrion, plastid	74.35	75.24
CDY29113	Canola	golgi	73.16	74.76
CDY13102	Canola	golgi	73.16	74.76
Bra027557.1-P	Field mustard	golgi	73.16	74.76
Bra033746.1-P	Field mustard	golgi	72.68	74.27
CDY49015	Canola	golgi	72.45	74.03
CDY49498	Canola	golgi	71.97	73.54
Solyc12g006410.1.1	Tomato	unclear	68.65	72.43
Bra005387.1-P	Field mustard	golgi, mitochondrion	77.67	72.03
AT5G44480.1	Thale cress	mitochondrion	72.45	69.95
Bra013466.1-P	Field mustard	mitochondrion	74.11	67.39
TraesCS1B01G478400.1	Wheat	endoplasmic reticulum, golgi	35.15	41.81
TraesCS5B01G181300.1	Wheat	plastid	34.92	39.2
TraesCS5B01G315700.1	Wheat	cytosol	33.02	37.77
TraesCS1B01G327200.1	Wheat	peroxisome	18.53	21.2
TraesCS6B01G385900.1	Wheat	plastid	20.67	19.86
TraesCS7B01G153900.1	Wheat	plastid	22.33	19.11
TraesCS7B01G056200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	19.95	18.96
TraesCS5B01G280700.1	Wheat	endoplasmic reticulum	20.43	17.99
TraesCS4B01G223700.1	Wheat	plastid	20.43	17.52
TraesCS4B01G205100.3	Wheat	mitochondrion	20.9	12.9
TraesCS5B01G023700.1	Wheat	cytosol, mitochondrion, plastid	20.43	12.89
TraesCS6B01G267600.1	Wheat	peroxisome	2.61	3.67

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349	PANTHER:PTHR43349:SF18	SUPFAM:SSF51735
TIGRFAMs:TIGR01179	EnsemblPlantsGene:TraesCS5B01G290300	EnsemblPlants:TraesCS5B01G290300.1	InterPro:UDP_G4E	TIGR:cd05247	SEG:seg

Description

No Description!

Coordinates

chr5B:+:476446095..476448596

Molecular Weight (calculated)

46769.3 Da

IEP (calculated)

8.866

GRAVY (calculated)

-0.243

Length

421 amino acids

Sequence
(BLAST)

001: MLPTGRGRPQ PRPAPRSWSF SDMDFSDPKR NSRYLSKIIM VALLTAMCVV MLTQPPCHRK APSVFSIHEL GVTHVLVTGG AGYIGSHAAL RLLKDSFRVT
101: IVDNLSRGNI GAVKVLQNLF PDPGRLQFIH ADLGDPKAVN RIFAENAFDA VMHFAAVAYV GESTLEPLRY YHNITANTLV VLEAMATHNV KTLIYSSTCA
201: TYGEPEKMPI TEETPQFPIN PYGKAKKMAE DIILDFSKLR KSDMSVMILR YFNVIGSDPE GRLGEAPPPE LREHGRISGA CFDAALGIIP GLKVKGTDYE
301: TADGTCVRDY IDVTDLVDAH VKALNKAERG KVGIYNVGTG RGRSVMEFVE ACKKATGVDI KVDYFPRRPG DYAEVYSNPA RINRELNWTA QHTELQESLR
401: VAWTWQKKHR SGYADSGRYI F

Best Arabidopsis Sequence Match ( AT1G30620.1 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.