Factsheet for Solyc02g069580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 4
golgi 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054459	Potato	mitochondrion	98.32	98.32
Solyc02g030230.2.1	Tomato	mitochondrion	88.73	88.94
KRH11871	Soybean	golgi, plastid	81.53	81.93
KRH36892	Soybean	golgi, mitochondrion	81.53	81.93
CDY71965	Canola	cytosol, mitochondrion	46.52	81.51
Solyc07g043550.2.1	Tomato	cytosol, unclear	58.99	81.46
Os04t0618200-02	Rice	golgi	76.02	81.07
KRH59194	Soybean	golgi, mitochondrion	80.82	81.01
Os08t0129700-01	Rice	mitochondrion	78.18	80.3
KRH43065	Soybean	golgi, mitochondrion, plastid	79.86	80.05
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	78.18	79.13
AT4G20460.1	Thale cress	golgi, mitochondrion	77.7	78.83
GSMUA_Achr11P...	Banana	mitochondrion	78.66	78.66
TraesCS2B01G482000.1	Wheat	golgi	77.7	78.64
EER95001	Sorghum	mitochondrion	76.74	78.62
CDX78998	Canola	mitochondrion	77.46	78.59
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	76.26	78.52
HORVU7Hr1G074300.2	Barley	golgi	76.26	78.52
GSMUA_Achr3P23390_001	Banana	mitochondrion	78.42	78.42
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	77.46	78.4
CDX82768	Canola	mitochondrion	77.22	78.35
GSMUA_Achr8P33320_001	Banana	mitochondrion	78.18	78.18
TraesCS2A01G460400.1	Wheat	unclear	77.22	78.16
TraesCS7A01G311100.1	Wheat	golgi	75.78	78.02
KXG27129	Sorghum	mitochondrion, plastid	77.46	77.83
GSMUA_Achr11P...	Banana	cytosol, golgi	72.9	77.75
CDY29113	Canola	golgi	76.74	77.67
Bra027557.1-P	Field mustard	golgi	76.74	77.67
CDY13102	Canola	golgi	76.5	77.43
Bra033746.1-P	Field mustard	golgi	76.26	77.18
TraesCS7B01G210700.2	Wheat	golgi	76.26	77.0
CDY49015	Canola	golgi	76.02	76.94
Bra020917.1-P	Field mustard	golgi, mitochondrion	75.78	76.89
Os07t0139400-01	Rice	plasma membrane	77.46	76.72
CDY49498	Canola	golgi	75.54	76.46
GSMUA_Achr4P31860_001	Banana	mitochondrion	76.02	76.2
HORVU5Hr1G077110.3	Barley	mitochondrion	76.74	76.01
TraesCS5A01G291300.1	Wheat	golgi	76.5	75.77
TraesCS5B01G290300.1	Wheat	mitochondrion	76.5	75.77
TraesCS5D01G298700.1	Wheat	mitochondrion	76.26	75.53
Solyc12g006410.1.1	Tomato	unclear	71.22	74.44
AT5G44480.1	Thale cress	mitochondrion	76.98	73.62
EER95854	Sorghum	mitochondrion, plastid	75.3	73.02
Bra013466.1-P	Field mustard	mitochondrion	75.78	68.25
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	35.73	42.82
Solyc08g082440.2.1	Tomato	cytosol, golgi	35.01	41.6
Zm00001d017999_P002	Maize	mitochondrion	28.78	38.59
Solyc08g080570.2.1	Tomato	cytosol	31.89	37.89
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	30.94	37.28
Solyc07g006220.1.1	Tomato	nucleus	22.3	21.88
Solyc08g079440.1.1	Tomato	nucleus	23.02	21.57
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	22.3	21.53
Solyc03g083550.1.1	Tomato	golgi	20.62	21.18
Solyc05g053790.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	21.82	21.02
Solyc05g050990.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion	21.82	20.92
Solyc09g092330.1.1	Tomato	nucleus	21.82	20.13
Solyc10g018260.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	20.86	20.0
Solyc01g091200.2.1	Tomato	nucleus	20.86	20.0
Solyc08g069110.2.1	Tomato	unclear	20.86	13.36
Solyc07g062130.2.1	Tomato	extracellular, unclear	19.66	12.17
Solyc10g007480.2.1	Tomato	nucleus	14.15	10.0
Solyc08g080140.2.1	Tomato	extracellular	2.88	3.99

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152
GO:GO:0016853	UniProt:K4B7U0	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349
PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc02g069580.2	EnsemblPlants:Solyc02g069580.2.1	TIGRFAMs:TIGR01179	InterPro:UDP_G4E
UniParc:UPI0002768291	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:39425936..39432077

Molecular Weight (calculated)

45767.2 Da

IEP (calculated)

9.270

GRAVY (calculated)

-0.210

Length

417 amino acids

Sequence
(BLAST)

001: MLGLGRGRAQ TRSSRSMSLG GMDYADPKKK SNFVGKILMA AVLTALCILM LKQSPTFNTP SAFSRHQPGV VHVLVTGGAG YIGSHAALRL LKENYRVTIV
101: DNLSRGNMGA VRILQELFPE PGRLQFIYAD LGDAKVVHQI FSQNAFDAVM HFAAVAYVGE STLDPLKYYH NITSNTLTVL EAMSAHGVPT LIYSSTCATY
201: GEPEKMPITE ETPQLPINPY GKAKKMAEDI ILDFHKNSNM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACYDA ARGIIPGLKV RGTDYKTTDG
301: TCIRDYIDVT DLVDAHVKAL EKSRPGKVGI YNVGTGRGRS VKEFVEACKA ATGVPIKVDF LPRRPGDYAE VFSDPTKIKL ELNWTAQHTD LQESLQVAWR
401: WQKSHLNGYG SSLVKSS

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.