Factsheet for TraesCS7D01G307500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

golgi 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	golgi, mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G074300.2	Barley	golgi	98.52	98.52
TraesCS7A01G311100.1	Wheat	golgi	98.02	98.02
TraesCS7B01G210700.2	Wheat	golgi	99.51	97.58
Os08t0129700-01	Rice	mitochondrion	91.85	91.63
EER95001	Sorghum	mitochondrion	91.11	90.66
Zm00001d047683_P003	Maize	mitochondrion	86.42	82.55
Zm00001d028825_P001	Maize	golgi, mitochondrion	85.93	82.46
Solyc07g043550.2.1	Tomato	cytosol, unclear	61.48	82.45
GSMUA_Achr3P23390_001	Banana	mitochondrion	82.47	80.1
GSMUA_Achr11P...	Banana	mitochondrion	81.98	79.62
CDY71965	Canola	cytosol, mitochondrion	46.67	79.41
AT2G34850.2	Thale cress	cytosol	45.93	78.81
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	80.0	78.64
PGSC0003DMT400080637	Potato	golgi	76.79	77.75
KRH36892	Soybean	golgi, mitochondrion	79.01	77.11
PGSC0003DMT400041159	Potato	golgi, mitochondrion	73.58	76.8
KRH11871	Soybean	golgi, plastid	78.52	76.63
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	78.52	76.26
KRH59194	Soybean	golgi, mitochondrion	77.78	75.72
PGSC0003DMT400054459	Potato	mitochondrion	77.78	75.54
AT4G20460.1	Thale cress	golgi, mitochondrion	76.54	75.43
Bra032409.1-P	Field mustard	mitochondrion	78.02	75.42
Solyc02g030230.2.1	Tomato	mitochondrion	77.28	75.24
CDY09555	Canola	mitochondrion	78.02	75.24
CDY02312	Canola	mitochondrion	78.02	75.24
CDX78998	Canola	mitochondrion	76.3	75.18
KRH43065	Soybean	golgi, mitochondrion, plastid	77.04	75.0
AT1G30620.4	Thale cress	golgi, mitochondrion	77.53	74.94
CDX82768	Canola	mitochondrion	76.05	74.94
TraesCS5D01G298700.1	Wheat	mitochondrion	77.53	74.58
Solyc12g006410.1.1	Tomato	unclear	73.09	74.19
CDY52524	Canola	golgi	77.28	73.82
CDY31644	Canola	golgi	76.79	73.35
CDY29113	Canola	golgi	74.57	73.3
CDY13102	Canola	golgi	74.32	73.06
Bra027557.1-P	Field mustard	golgi	74.32	73.06
Bra033746.1-P	Field mustard	golgi	74.32	73.06
Bra020917.1-P	Field mustard	golgi, mitochondrion	74.07	72.99
CDY49015	Canola	golgi	74.07	72.82
CDY49498	Canola	golgi	73.83	72.57
Bra005387.1-P	Field mustard	golgi, mitochondrion	77.28	68.94
AT5G44480.1	Thale cress	mitochondrion	74.07	68.81
Bra013466.1-P	Field mustard	mitochondrion	74.81	65.44
TraesCS1D01G451900.1	Wheat	endoplasmic reticulum, golgi	34.81	39.83
TraesCS5D01G188200.1	Wheat	plastid	34.57	37.33
TraesCS5D01G321100.1	Wheat	cytosol	33.09	36.31
TraesCS7D01G154100.1	Wheat	golgi	22.47	21.02
TraesCS6D01G335600.1	Wheat	plastid	22.72	21.0
TraesCS1D01G315500.1	Wheat	cytosol, mitochondrion, plastid	18.77	20.65
TraesCS7D01G257800.1	Wheat	plastid	21.48	17.76
TraesCS5D01G288700.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	20.99	17.67
TraesCS4D01G224000.1	Wheat	plastid	20.99	17.63
TraesCS5D01G032700.1	Wheat	cytosol, mitochondrion, plastid	20.74	12.59
TraesCS4D01G206000.1	Wheat	mitochondrion	20.74	12.32
TraesCS6D01G238800.1	Wheat	peroxisome	2.72	3.67

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	SUPFAM:SSF51735
TIGRFAMs:TIGR01179	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G307500	EnsemblPlants:TraesCS7D01G307500.1	InterPro:UDP_G4E	TIGR:cd05247

Description

No Description!

Coordinates

chr7D:-:389458106..389464546

Molecular Weight (calculated)

44672.7 Da

IEP (calculated)

8.810

GRAVY (calculated)

-0.225

Length

405 amino acids

Sequence
(BLAST)

001: MIPANRRGTQ PRAGMEYFDA RRKPHNIGKV IVALLFIALC IFVLKQSPGF GGNSVFSRHE PGVTHVLVTG GAGYIGSHAS LRLLKDNYRV TIVDNLSRGN
101: KGAVKVLQEL FPEPGRLQFI YADLGDQKSV NKIFSENAFD AVMHFAAVAY VGESTMEPLR YYHNITSNTL LILEAMASHG VKTLIYSSTC ATYGEPEKMP
201: IIETTPQLPI NPYGKAKKMA EDIILDFSKR TDMAVMILRY FNVIGSDPEG RLGEAPRPEL REHGRISGAC FDAALGVISG LKVKGIDYPT ADGTCIRDYI
301: DVTDLVDAHV KALNKAEPSR VGIYNVGTGR GRSVKEFVDA CKQATGVDIK IEYLSRRPGD YAEVFSDPTK INSELNWTAQ HTDLKESLSV AWRWQKSHPR
401: GYGAN

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.