Factsheet for AT1G30620.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 4
golgi 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09555	Canola	mitochondrion	96.18	95.95
Bra032409.1-P	Field mustard	mitochondrion	95.7	95.7
CDY02312	Canola	mitochondrion	95.7	95.48
AT2G34850.2	Thale cress	cytosol	51.07	90.68
Solyc07g043550.2.1	Tomato	cytosol, unclear	61.1	84.77
AT4G20460.1	Thale cress	golgi, mitochondrion	80.43	82.0
KRH43065	Soybean	golgi, mitochondrion, plastid	80.43	81.01
KRH59194	Soybean	golgi, mitochondrion	80.19	80.77
KRH36892	Soybean	golgi, mitochondrion	79.95	80.72
KRH11871	Soybean	golgi, plastid	79.71	80.48
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	78.52	79.85
Os04t0618200-02	Rice	golgi	74.46	79.8
PGSC0003DMT400041159	Potato	golgi, mitochondrion	73.75	79.64
VIT_03s0017g00980.t01	Wine grape	golgi	79.0	79.38
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	78.04	79.37
GSMUA_Achr11P...	Banana	cytosol, golgi	73.99	79.28
TraesCS2A01G460400.1	Wheat	unclear	77.8	79.13
TraesCS2B01G482000.1	Wheat	golgi	77.8	79.13
GSMUA_Achr3P23390_001	Banana	mitochondrion	78.52	78.9
GSMUA_Achr11P...	Banana	mitochondrion	78.04	78.42
EER95001	Sorghum	mitochondrion	76.13	78.38
Os08t0129700-01	Rice	mitochondrion	75.66	78.08
HORVU7Hr1G074300.2	Barley	golgi	75.18	77.78
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	74.94	77.53
Os07t0139400-01	Rice	plasma membrane	77.8	77.43
KXG27129	Sorghum	mitochondrion, plastid	76.37	77.11
TraesCS7A01G311100.1	Wheat	golgi	74.46	77.04
GSMUA_Achr8P33320_001	Banana	mitochondrion	76.37	76.74
GSMUA_Achr4P31860_001	Banana	mitochondrion	76.13	76.68
TraesCS5A01G291300.1	Wheat	golgi	76.61	76.25
HORVU5Hr1G077110.3	Barley	mitochondrion	76.61	76.25
TraesCS7B01G210700.2	Wheat	golgi	74.94	76.03
TraesCS5B01G290300.1	Wheat	mitochondrion	76.37	76.01
TraesCS5D01G298700.1	Wheat	mitochondrion	76.37	76.01
Solyc12g006410.1.1	Tomato	unclear	72.08	75.69
AT5G44480.1	Thale cress	mitochondrion	77.33	74.31
EER95854	Sorghum	mitochondrion, plastid	75.89	73.95
AT4G23920.1	Thale cress	cytosol	35.56	42.57
AT1G64440.1	Thale cress	cytosol, golgi	35.08	42.24
AT4G10960.1	Thale cress	golgi	35.32	42.17
Zm00001d017999_P002	Maize	mitochondrion	29.59	39.87
AT1G63180.1	Thale cress	cytosol	33.17	39.6
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	32.46	38.75
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	31.26	37.86
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	22.91	22.02
AT3G23820.1	Thale cress	endoplasmic reticulum	23.63	21.52
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	21.96	21.45
AT1G02000.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	21.48	20.74
AT4G00110.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	21.24	20.7
AT2G45310.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	21.24	20.37
AT3G28530.1	Thale cress	cytosol, nucleus	1.19	20.0
AT1G78570.1	Thale cress	cytosol, mitochondrion, peroxisome	21.96	13.75
AT1G53500.1	Thale cress	cytosol, extracellular, peroxisome	21.48	13.49
AT3G14790.2	Thale cress	mitochondrion	21.24	13.34
AT1G63000.1	Thale cress	cytosol	2.39	3.32

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:839942
UniProt:A0A178WAW9	ProteinID:AAD25749.1	ProteinID:AEE31251.1	ProteinID:AEE31252.1	EMBL:AF083751	EMBL:AF325108
EMBL:AK220800	EMBL:AK317172	ProteinID:ANM59489.1	ProteinID:ANM59490.1	ArrayExpress:AT1G30620	EnsemblPlantsGene:AT1G30620
RefSeq:AT1G30620	TAIR:AT1G30620	RefSeq:AT1G30620-TAIR-G	EnsemblPlants:AT1G30620.4	EMBL:AY064973	EMBL:AY195742
UniProt:B9DGJ1	EMBL:BT002614	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006012
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009832	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016853	GO:GO:0019567	GO:GO:0032580
GO:GO:0033358	GO:GO:0045227	GO:GO:0050373	Symbol:HSR8	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
RefSeq:NP_001319115.1	RefSeq:NP_001321844.1	RefSeq:NP_001321845.1	RefSeq:NP_174350.2	ProteinID:OAP14192.1	PFAM:PF16363
PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	UniProt:Q9SA77	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E
UniParc:UPI0000006304	:	:	:	:	:

Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]

Coordinates

chr1:+:10854935..10858237

Molecular Weight (calculated)

46313.7 Da

IEP (calculated)

9.420

GRAVY (calculated)

-0.259

Length

419 amino acids

Sequence
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.