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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86828 Canola golgi 93.16 94.24
Bra035262.1-P Field mustard golgi 93.16 94.24
CDY40862 Canola cytosol, golgi 92.31 93.37
AT4G23920.1 Thale cress cytosol 88.32 88.57
AT3G28530.1 Thale cress cytosol, nucleus 5.7 80.0
AT1G64440.1 Thale cress cytosol, golgi 78.63 79.31
GSMUA_Achr6P22620_001 Banana golgi, mitochondrion 77.49 77.94
Solyc12g055930.1.1 Tomato cytosol, extracellular, golgi 77.21 77.87
PGSC0003DMT400012829 Potato cytosol, extracellular, golgi 76.92 77.59
GSMUA_Achr5P09200_001 Banana golgi 78.35 77.46
GSMUA_Achr9P00170_001 Banana extracellular, golgi 76.07 76.5
GSMUA_Achr4P02670_001 Banana golgi 75.78 76.22
Os09t0323000-01 Rice cytosol 73.22 69.65
Zm00001d005598_P001 Maize plastid 71.79 69.04
EER98731 Sorghum plastid 71.51 68.58
HORVU5Hr1G055920.8 Barley plastid 72.93 68.45
TraesCS5A01G183100.1 Wheat plastid 72.65 68.0
TraesCS5B01G181300.1 Wheat plastid 72.65 68.0
TraesCS5D01G188200.1 Wheat plastid 72.65 68.0
Zm00001d020093_P002 Maize golgi 56.7 65.89
AT1G12780.1 Thale cress cytoskeleton, cytosol, peroxisome 65.24 65.24
AT1G63180.1 Thale cress cytosol 64.67 64.67
GSMUA_Achr8P27530_001 Banana cytosol, golgi, plastid 77.78 64.39
Os08t0374800-01 Rice golgi 72.93 62.75
GSMUA_Achr3P16370_001 Banana golgi, mitochondrion, plastid 75.78 61.43
EES14924 Sorghum endoplasmic reticulum, golgi, plastid 73.79 61.23
Zm00001d032346_P002 Maize endoplasmic reticulum, golgi, plastid 73.79 61.23
GSMUA_Achr9P06140_001 Banana plastid 76.92 51.82
GSMUA_Achr6P26620_001 Banana plastid 76.92 50.28
AT2G34850.2 Thale cress cytosol 27.64 41.1
AT1G30620.4 Thale cress golgi, mitochondrion 42.17 35.32
AT4G20460.1 Thale cress golgi, mitochondrion 41.31 35.28
AT5G44480.1 Thale cress mitochondrion 41.6 33.49
AT4G12250.1 Thale cress cytosol, endoplasmic reticulum, golgi 26.21 21.1
AT4G00110.1 Thale cress cytosol, endoplasmic reticulum, golgi, plastid 25.36 20.7
AT4G30440.1 Thale cress cytosol, endoplasmic reticulum, golgi, plastid 25.07 20.51
AT1G02000.1 Thale cress endoplasmic reticulum, golgi, mitochondrion, plastid 25.36 20.51
AT3G23820.1 Thale cress endoplasmic reticulum 26.5 20.22
AT2G45310.1 Thale cress cytosol, endoplasmic reticulum, golgi, plastid 24.79 19.91
AT1G78570.1 Thale cress cytosol, mitochondrion, peroxisome 24.5 12.86
AT3G14790.2 Thale cress mitochondrion 23.65 12.44
AT1G53500.1 Thale cress cytosol, extracellular, peroxisome 23.36 12.29
AT1G63000.1 Thale cress cytosol 3.42 3.99
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.8Gene3D:3.40.50.720Gene3D:3.90.25.10EntrezGene:826696
ProteinID:AAC33955.1ProteinID:AEE82951.1ArrayExpress:AT4G10960EnsemblPlantsGene:AT4G10960RefSeq:AT4G10960TAIR:AT4G10960
RefSeq:AT4G10960-TAIR-GEnsemblPlants:AT4G10960.1TAIR:AT4G10960.1EMBL:AY065354EMBL:AY085528EMBL:AY117180
EMBL:AY140073ProteinID:CAB40064.1ProteinID:CAB81197.1GO:GO:0003674GO:GO:0003824GO:GO:0003978
GO:GO:0005975GO:GO:0006012GO:GO:0008150GO:GO:0008152GO:GO:0016853GO:GO:0016857
InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfRefSeq:NP_192834.1InterPro:Nuc_sugar_epimPFAM:PF16363PO:PO:0000293
PO:PO:0001016PO:PO:0001017PO:PO:0009005PO:PO:0009025PO:PO:0025195PO:PO:0025281
PRINTS:PR01713PANTHER:PTHR43725PANTHER:PTHR43725:SF11UniProt:Q9SN58SUPFAM:SSF51735TIGRFAMs:TIGR01179
InterPro:UDP_G4ESymbol:UGE5UniParc:UPI00000A450ESEG:seg::
Description
UGE5UDP-glucose 4-epimerase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN58]
Coordinates
chr4:-:6715874..6718550
Molecular Weight (calculated)
38619.8 Da
IEP (calculated)
5.608
GRAVY (calculated)
-0.222
Length
351 amino acids
Sequence
(BLAST)
001: MMARNVLVSG GAGYIGSHTV LQLLLGGYSV VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRSA LEKIFSETKF DAVIHFAGLK AVGESVEKPL
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.