Factsheet for Os09t0323000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0374800-01
Os09t0323000-01
Os09t0526700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23920.1	Os09t0526700-01	AT1G12780.1	21798944
AT4G23920.1	Os08t0374800-01	AT4G10960.1	21798944
AT4G23920.1	Os09t0323000-01	AT4G10960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98731	Sorghum	plastid	84.28	84.97
TraesCS5D01G188200.1	Wheat	plastid	85.09	83.73
TraesCS5B01G181300.1	Wheat	plastid	84.82	83.47
TraesCS5A01G183100.1	Wheat	plastid	84.82	83.47
HORVU5Hr1G055920.8	Barley	plastid	84.55	83.42
Zm00001d005598_P001	Maize	plastid	82.11	83.01
Zm00001d020093_P002	Maize	golgi	65.31	79.8
GSMUA_Achr4P02670_001	Banana	golgi	72.09	76.22
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	71.54	75.64
Os05t0595100-01	Rice	plastid	72.36	75.42
Os08t0374800-01	Rice	golgi	82.66	74.75
GSMUA_Achr5P09200_001	Banana	golgi	71.54	74.37
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	69.92	73.93
AT4G10960.1	Thale cress	golgi	69.65	73.22
CDY47611	Canola	golgi	68.02	72.13
CDY03506	Canola	cytosol, golgi	67.75	71.84
Bra013744.1-P	Field mustard	cytosol, golgi	67.75	71.84
Bra019257.1-P	Field mustard	plastid	67.75	71.84
CDY40862	Canola	cytosol, golgi	67.48	71.76
AT1G64440.1	Thale cress	cytosol, golgi	67.48	71.55
CDX86828	Canola	golgi	67.21	71.47
Bra035262.1-P	Field mustard	golgi	67.21	71.47
AT4G23920.1	Thale cress	cytosol	67.48	71.14
CDY50431	Canola	cytosol	66.67	70.69
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	66.4	70.4
PGSC0003DMT400012829	Potato	cytosol, extracellular, golgi	66.4	70.4
Bra027732.1-P	Field mustard	golgi	65.31	70.26
CDY47846	Canola	golgi	65.31	70.26
CDY08378	Canola	golgi	65.04	69.57
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	71.27	62.03
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	69.65	59.35
Os09t0526700-01	Rice	cytosol	56.37	55.76
GSMUA_Achr9P06140_001	Banana	plastid	71.27	50.48
GSMUA_Achr6P26620_001	Banana	plastid	72.09	49.53
Os04t0618200-02	Rice	golgi	39.3	37.08
Os08t0129700-01	Rice	mitochondrion	37.94	34.48
Os07t0139400-01	Rice	plasma membrane	39.3	34.44
Os06t0187200-01	Rice	golgi, peroxisome	19.51	23.3
Os08t0526100-01	Rice	plastid	26.83	20.71
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	23.85	20.14
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	26.56	19.68
Os03t0249500-01	Rice	plastid	25.47	19.42
Os03t0278200-01	Rice	nucleus, plasma membrane	24.12	13.19
Os05t0203400-00	Rice	plastid	10.3	11.38
Os02t0678400-01	Rice	plasma membrane	3.52	4.18
Os03t0249400-01	Rice	nucleus, plasma membrane	0.54	1.57

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:4346723
EMBL:AK121426	ProteinID:BAD23675.1	ProteinID:BAF24783.1	ProteinID:BAT07457.1	ProteinID:EEE69457.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152
GO:GO:0016853	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os09g0323000	EnsemblPlants:Os09t0323000-01	PFAM:PF16363
PANTHER:PTHR43725	PANTHER:PTHR43725:SF1	UniProt:Q6K2E1	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E
UniParc:UPI00003B0707	RefSeq:XP_015611994.1	SEG:seg	:	:	:

Description

UDP-glucose epimerase 4Similar to UDP-galactose 4-epimerase-like protein. (Os09t0323000-01);Similar to UDP-D-glucose epimerase 2. (Os09t0323000-02)

Coordinates

chr9:-:9437790..9442553

Molecular Weight (calculated)

39649.4 Da

IEP (calculated)

8.547

GRAVY (calculated)

-0.090

Length

369 amino acids

Sequence
(BLAST)

001: MAGGEVVAVA AAAAGTSRTV LVTGGAGYIG SHTVLQLLAA GFRVVVADSL GNSSELAVRR VAALAGDKAR NLSLHKVDIR DKGGLEKVFS STRFDAVVHF
101: AGLKAVGESV QKPLLYYDHN VAGTIILLEV MAAHGCKKLV FSSSAAVYGS PKNSPCTEEF PLTPHNPYGR TKLIAEEICR DIYHSDSEWS IILLRYFNPV
201: GAHPSGYLGE DPCGIPNNLM PFVQQVAVGR RPSLTIFGND YATKDGTGVR DYIHVVDLAE GHIAALRKLF ESSIGCQAYN LGTGKGTSVL EIVNAFEKVS
301: GKKIPLVIGP RRPGDAEILF SSAAKAEREF KWKAKYGIEE MCRDQWNWAS KNPFGYASPD STKQNGHSH

Best Arabidopsis Sequence Match ( AT4G10960.1 )
(BLAST)

001: MMARNVLVSG GAGYIGSHTV LQLLLGGYSV VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRSA LEKIFSETKF DAVIHFAGLK AVGESVEKPL
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H

Arabidopsis Description

UGE5UDP-glucose 4-epimerase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN58]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.