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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035262.1-P Field mustard golgi 99.14 99.14
CDX86828 Canola golgi 99.14 99.14
AT4G10960.1 Thale cress golgi 93.37 92.31
CDY50431 Canola cytosol 86.46 86.21
CDY03506 Canola cytosol, golgi 86.46 86.21
CDY47611 Canola golgi 86.17 85.92
Solyc12g055930.1.1 Tomato cytosol, extracellular, golgi 78.1 77.87
PGSC0003DMT400012829 Potato cytosol, extracellular, golgi 77.81 77.59
CDY47846 Canola golgi 76.66 77.55
CDY08378 Canola golgi 76.66 77.1
GSMUA_Achr9P00170_001 Banana extracellular, golgi 75.79 75.36
GSMUA_Achr5P09200_001 Banana golgi 76.95 75.21
GSMUA_Achr6P22620_001 Banana golgi, mitochondrion 75.5 75.07
GSMUA_Achr4P02670_001 Banana golgi 73.49 73.07
Os09t0323000-01 Rice cytosol 71.76 67.48
HORVU5Hr1G055920.8 Barley plastid 72.62 67.38
EER98731 Sorghum plastid 70.32 66.67
TraesCS5A01G183100.1 Wheat plastid 72.05 66.67
TraesCS5B01G181300.1 Wheat plastid 72.05 66.67
TraesCS5D01G188200.1 Wheat plastid 72.05 66.67
Zm00001d005598_P001 Maize plastid 70.03 66.58
CDY69000 Canola cytosol 63.69 65.97
CDY21065 Canola cytosol 66.57 65.81
CDY31278 Canola cytosol 66.57 65.81
CDY49193 Canola cytosol 65.13 64.39
CDY47346 Canola cytosol 65.13 64.39
GSMUA_Achr8P27530_001 Banana cytosol, golgi, plastid 78.1 63.92
Zm00001d020093_P002 Maize golgi 55.04 63.24
Os08t0374800-01 Rice golgi 72.05 61.27
GSMUA_Achr3P16370_001 Banana golgi, mitochondrion, plastid 75.79 60.74
EES14924 Sorghum endoplasmic reticulum, golgi, plastid 73.2 60.05
Zm00001d032346_P002 Maize endoplasmic reticulum, golgi, plastid 73.2 60.05
CDY49495 Canola cytosol 14.41 51.02
GSMUA_Achr9P06140_001 Banana plastid 76.08 50.67
GSMUA_Achr6P26620_001 Banana plastid 76.08 49.16
CDY71965 Canola cytosol, mitochondrion 26.22 38.24
CDY60264 Canola plastid 66.57 37.81
CDY29113 Canola golgi 41.79 35.19
CDY09555 Canola mitochondrion 42.36 35.0
CDY13102 Canola golgi 41.5 34.95
CDY49498 Canola golgi 41.5 34.95
CDY49015 Canola golgi 41.5 34.95
CDY02312 Canola mitochondrion 42.07 34.76
CDX78998 Canola mitochondrion 40.92 34.55
CDX82768 Canola mitochondrion 40.63 34.31
CDY31644 Canola golgi 41.79 34.2
CDY52524 Canola golgi 41.5 33.96
CDX97356 Canola cytosol, endoplasmic reticulum, golgi 26.22 21.21
CDX94504 Canola cytosol, endoplasmic reticulum, peroxisome 26.51 21.15
CDX92990 Canola endoplasmic reticulum 27.38 20.83
CDX77481 Canola endoplasmic reticulum 27.09 20.75
CDY04398 Canola cytosol, endoplasmic reticulum, golgi 25.65 20.75
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.65 20.75
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.65 20.75
CDX86716 Canola cytosol, endoplasmic reticulum, peroxisome 25.94 20.74
CDY63064 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.65 20.7
CDY53207 Canola endoplasmic reticulum 27.09 20.66
CDY64583 Canola endoplasmic reticulum 27.38 20.65
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 27.38 20.65
CDX85133 Canola endoplasmic reticulum 27.09 20.61
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.36 20.47
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.07 20.23
CDY67756 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.07 20.0
CDX95646 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.07 20.0
CDY25850 Canola cytosol, mitochondrion, peroxisome 21.9 17.76
CDY35137 Canola cytosol, mitochondrion, plastid 25.07 12.99
CDY40003 Canola cytosol, mitochondrion, plastid 25.07 12.99
CDY24092 Canola cytosol, mitochondrion, peroxisome 23.63 12.33
CDY45116 Canola cytosol, mitochondrion, peroxisome 23.63 12.33
CDY60210 Canola cytosol, mitochondrion, peroxisome 23.63 12.28
CDX88455 Canola cytosol, peroxisome, plastid 24.78 12.16
CDY32340 Canola cytosol, mitochondrion, peroxisome 22.48 12.13
CDY20084 Canola cytosol, mitochondrion, peroxisome 22.48 12.11
CDX97601 Canola cytosol, mitochondrion, plastid 22.48 12.07
CDX98494 Canola cytosol, mitochondrion, plastid 22.48 12.07
CDX81794 Canola plastid 7.2 7.2
CDY71423 Canola cytosol, nucleus 6.92 5.57
CDY72469 Canola cytosol 1.73 4.55
CDY45471 Canola cytosol 3.46 4.04
CDY45969 Canola cytosol 3.46 4.04
CDY57072 Canola cytosol, extracellular, peroxisome 3.75 4.02
CDX98052 Canola cytosol 3.46 3.72
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.8Gene3D:3.40.50.720Gene3D:3.90.25.10GO:A0A078HSN7
UniProt:A0A078HSN7EnsemblPlants:CDY40862ProteinID:CDY40862ProteinID:CDY40862.1GO:GO:0003674GO:GO:0003824
GO:GO:0003978GO:GO:0005975GO:GO:0006012GO:GO:0008150GO:GO:0008152GO:GO:0016853
EnsemblPlantsGene:GSBRNA2T00071866001InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPFAM:PF16363PANTHER:PTHR43725PANTHER:PTHR43725:SF11
MetaCyc:PWY-3821MetaCyc:PWY-6317MetaCyc:PWY-6397MetaCyc:PWY-6527MetaCyc:PWY-7328MetaCyc:PWY-7344
SUPFAM:SSF51735TIGRFAMs:TIGR01179InterPro:UDP_G4EUniPathway:UPA00214UniParc:UPI0004EBD448:
Description
BnaC09g26030DBnaC09g26030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSN7]
Coordinates
chrLK032482:+:189339..192211
Molecular Weight (calculated)
38067.0 Da
IEP (calculated)
5.243
GRAVY (calculated)
-0.251
Length
347 amino acids
Sequence
(BLAST)
001: MVSKNVLVTG GAGYIGSHTV LQLLTGGYSA VVVDNLDNSS AASLQRVKKL AAEHGEHLSF HQVDLRDRPA LEKIFSETKF DAVIHFAGLK AVGESVDKPL
101: LYYNNNLAGT ITLLEVMAQY NCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIVLL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVYGNDYNTV DGTGVRDYIH VMDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVTAGRRPG
301: DAEIVYASTE RAESELNWKA KYGIEEMCRD SWNWTSNNPY GYDSSDA
Best Arabidopsis Sequence Match ( AT4G10960.1 )
(BLAST)
001: MMARNVLVSG GAGYIGSHTV LQLLLGGYSV VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRSA LEKIFSETKF DAVIHFAGLK AVGESVEKPL
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H
Arabidopsis Description
UGE5UDP-glucose 4-epimerase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN58]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.