Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 96.97 | 96.97 |
| AT4G12250.1 | Thale cress | cytosol, endoplasmic reticulum, golgi | 94.87 | 93.35 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 93.47 | 92.18 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 93.24 | 92.17 |
| VIT_02s0241g00180.t01 | Wine grape | cytosol, plastid | 41.96 | 76.27 |
| VIT_00s2240g00010.t01 | Wine grape | cytosol, endoplasmic reticulum, golgi, plastid | 67.13 | 74.23 |
| KRH04016 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 74.36 | 74.19 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 74.13 | 73.95 |
| KRH57292 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 73.66 | 73.66 |
| VIT_00s1525g00010.t01 | Wine grape | cytosol, endoplasmic reticulum, golgi, plastid | 74.36 | 73.33 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 73.19 | 72.18 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 72.96 | 71.95 |
| PGSC0003DMT400010106 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 73.19 | 70.4 |
| Solyc08g079440.1.1 | Tomato | nucleus | 72.73 | 70.11 |
| GSMUA_Achr4P17900_001 | Banana | endoplasmic reticulum, mitochondrion, peroxisome | 66.67 | 66.51 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 65.73 | 65.73 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 65.73 | 65.73 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 65.73 | 65.58 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 65.5 | 65.35 |
| GSMUA_Achr5P18760_001 | Banana | endoplasmic reticulum, golgi, mitochondrion | 68.3 | 63.83 |
| CDX77481 | Canola | endoplasmic reticulum | 65.73 | 62.25 |
| CDX85133 | Canola | endoplasmic reticulum | 65.73 | 61.84 |
| CDY53207 | Canola | endoplasmic reticulum | 65.5 | 61.76 |
| CDX92990 | Canola | endoplasmic reticulum | 65.5 | 61.62 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 65.73 | 61.3 |
| CDY64583 | Canola | endoplasmic reticulum | 65.73 | 61.3 |
| Os03t0249500-01 | Rice | plastid | 66.2 | 58.68 |
| TraesCS4A01G080300.1 | Wheat | plastid | 64.8 | 58.16 |
| EER95171 | Sorghum | plastid | 64.8 | 57.92 |
| Zm00001d047915_P001 | Maize | plastid | 64.57 | 57.83 |
| TraesCS4D01G224000.1 | Wheat | plastid | 64.8 | 57.68 |
| Zm00001d028427_P001 | Maize | plastid | 64.34 | 57.62 |
| TraesCS4B01G223700.1 | Wheat | plastid | 65.03 | 56.82 |
| HORVU4Hr1G063010.1 | Barley | peroxisome | 64.8 | 54.09 |
| CDY31278 | Canola | cytosol | 22.14 | 27.07 |
| CDY47346 | Canola | cytosol | 22.14 | 27.07 |
| CDY49193 | Canola | cytosol | 22.14 | 27.07 |
| CDY21065 | Canola | cytosol | 22.14 | 27.07 |
| CDY47611 | Canola | golgi | 21.68 | 26.72 |
| CDY69000 | Canola | cytosol | 20.75 | 26.57 |
| CDY03506 | Canola | cytosol, golgi | 21.45 | 26.44 |
| CDY40862 | Canola | cytosol, golgi | 20.75 | 25.65 |
| CDX86828 | Canola | golgi | 20.75 | 25.65 |
| CDY08378 | Canola | golgi | 20.28 | 25.22 |
| CDY47846 | Canola | golgi | 20.05 | 25.07 |
| CDY50431 | Canola | cytosol | 20.05 | 24.71 |
| CDY49498 | Canola | golgi | 21.91 | 22.82 |
| CDX78998 | Canola | mitochondrion | 21.68 | 22.63 |
| CDX82768 | Canola | mitochondrion | 21.68 | 22.63 |
| CDY49015 | Canola | golgi | 21.68 | 22.57 |
| CDY29113 | Canola | golgi | 21.45 | 22.33 |
| CDY13102 | Canola | golgi | 21.45 | 22.33 |
| CDY02312 | Canola | mitochondrion | 21.68 | 22.14 |
| CDY09555 | Canola | mitochondrion | 21.68 | 22.14 |
| CDY52524 | Canola | golgi | 21.68 | 21.93 |
| CDY31644 | Canola | golgi | 21.68 | 21.93 |
| CDY71965 | Canola | cytosol, mitochondrion | 11.19 | 20.17 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 19.81 | 19.86 |
| CDY60264 | Canola | plastid | 22.14 | 15.55 |
| CDY49495 | Canola | cytosol | 3.26 | 14.29 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 21.91 | 14.03 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 21.91 | 14.03 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 21.68 | 13.92 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 21.45 | 13.83 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 21.45 | 13.83 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 20.51 | 13.62 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 20.51 | 13.62 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 20.28 | 13.53 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 20.28 | 13.51 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 21.91 | 13.3 |
| CDX81794 | Canola | plastid | 6.06 | 7.49 |
| CDY72469 | Canola | cytosol | 1.86 | 6.06 |
| CDY71423 | Canola | cytosol, nucleus | 5.83 | 5.8 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.2 | 5.57 |
| CDY45969 | Canola | cytosol | 3.26 | 4.71 |
| CDY45471 | Canola | cytosol | 3.26 | 4.71 |
| CDX98052 | Canola | cytosol | 3.03 | 4.02 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078EXS4 | EnsemblPlants:CDY04398 | ProteinID:CDY04398 |
| ProteinID:CDY04398.1 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016857 | GO:GO:0050662 | EnsemblPlantsGene:GSBRNA2T00118403001 | InterPro:NAD(P)-bd_dom_sf |
| InterPro:Nuc_sugar_epim | PFAM:PF01370 | PRINTS:PR01713 | PANTHER:PTHR43574 | PANTHER:PTHR43574:SF21 | SUPFAM:SSF51735 |
| TMHMM:TMhelix | UniParc:UPI0004EE2140 | SEG:seg | : | : | : |
Description
BnaC02g28500D
Coordinates
chrLK031953:-:470370..471967
Molecular Weight (calculated)
47243.2 Da
IEP (calculated)
10.371
GRAVY (calculated)
-0.169
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHLDDLPST PGKYKVLPYG VLHNHRYLRL SKLTLWASLF LALFLIYLVL SPPPSSSRRS LNDSSVKYGG SHWEKQVRKS ACPRSSGGLT VLVTGAAGFV
101: GTHVSIALRR RGDGVLGLDN FNRYYDPKLK RARQGLLERS GVFVVEGDIN DAVLLRKLFD VVLFTHVMHL AAQAGVRYAM QNPGSYVNSN IAGFVNLLEV
201: SKAASPQPAV VWASSSSVYG LNTKVPFSEK DRTDQPASLY AATKKAGEGI AHTYNHIYGL SLTGLRFFTV YGPWGRPDMA YFFFTKDILK GKTITVFESP
301: DKGSVARDFT YIDDIVRGCL GALDTAEKST GSGGKKKGPA MFRIYNLGNT SPVPVSKLVT ILEKLLKMKA KRKIMPLPRN GDVEFTHANI TLAQTEIGYK
401: PEVDLETGLK KFVKWYMGFH TGSKKKSSS
101: GTHVSIALRR RGDGVLGLDN FNRYYDPKLK RARQGLLERS GVFVVEGDIN DAVLLRKLFD VVLFTHVMHL AAQAGVRYAM QNPGSYVNSN IAGFVNLLEV
201: SKAASPQPAV VWASSSSVYG LNTKVPFSEK DRTDQPASLY AATKKAGEGI AHTYNHIYGL SLTGLRFFTV YGPWGRPDMA YFFFTKDILK GKTITVFESP
301: DKGSVARDFT YIDDIVRGCL GALDTAEKST GSGGKKKGPA MFRIYNLGNT SPVPVSKLVT ILEKLLKMKA KRKIMPLPRN GDVEFTHANI TLAQTEIGYK
401: PEVDLETGLK KFVKWYMGFH TGSKKKSSS
001: MSHLDDLPST PGKYKTDKVP PYGILHHHRY LRLSKLTLWA SLFLALFLFY LVLSPPPSPS RRNLNDSSSI SAAKYGGSHW EKQVRKSARP RSHGGLTVLV
101: TGASGFVGTH VSIALRRRGD GVLGLDNFNR YYDPKLKRAR QGLLERSGVF VVEGDINDAV LLRKLFDVVL FTHVMHLAAQ AGVRYAMQNP GSYVNSNIAG
201: FVNLLEVSKS ANPQPAIVWA SSSSVYGLNS KVPFSEKDRT DQPASLYAAT KKAGEGIAHT YNHIYGLSLT GLRFFTVYGP WGRPDMAYFF FTKDILKGKT
301: ITVFESPDKG SVARDFTYID DIVKGCLGAL DTAEKSTGSG GKKKGPAMFR IYNLGNTSPV PVTKLVTILE KLLKMKAKKK IMPLPRNGDV EFTHANITLA
401: QAELGYKPAV DLETGLKKFV KWYMGFYTGS KKKSSW
101: TGASGFVGTH VSIALRRRGD GVLGLDNFNR YYDPKLKRAR QGLLERSGVF VVEGDINDAV LLRKLFDVVL FTHVMHLAAQ AGVRYAMQNP GSYVNSNIAG
201: FVNLLEVSKS ANPQPAIVWA SSSSVYGLNS KVPFSEKDRT DQPASLYAAT KKAGEGIAHT YNHIYGLSLT GLRFFTVYGP WGRPDMAYFF FTKDILKGKT
301: ITVFESPDKG SVARDFTYID DIVKGCLGAL DTAEKSTGSG GKKKGPAMFR IYNLGNTSPV PVTKLVTILE KLLKMKAKKK IMPLPRNGDV EFTHANITLA
401: QAELGYKPAV DLETGLKKFV KWYMGFYTGS KKKSSW
Arabidopsis Description
GAE5GAE5 [Source:UniProtKB/TrEMBL;Acc:A0A178UUD1]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.