Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- endoplasmic reticulum 2
- golgi 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G23820.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT3G23820.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014987.1-P | Field mustard | endoplasmic reticulum | 99.12 | 99.56 |
| CDX77481 | Canola | endoplasmic reticulum | 98.9 | 99.56 |
| CDX92990 | Canola | endoplasmic reticulum | 94.96 | 94.96 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 95.61 | 94.78 |
| CDY53207 | Canola | endoplasmic reticulum | 94.52 | 94.73 |
| CDY64583 | Canola | endoplasmic reticulum | 95.39 | 94.57 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 94.3 | 93.48 |
| VIT_05s0029g00420.t01 | Wine grape | endoplasmic reticulum | 78.95 | 79.82 |
| PGSC0003DMT400053071 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 75.44 | 76.79 |
| KRH58854 | Soybean | endoplasmic reticulum, golgi | 69.74 | 76.44 |
| Solyc09g092330.1.1 | Tomato | nucleus | 75.22 | 75.89 |
| KRH31569 | Soybean | mitochondrion | 76.75 | 75.76 |
| KRG97348 | Soybean | endoplasmic reticulum | 72.37 | 75.17 |
| PGSC0003DMT400011867 | Potato | cytosol, endoplasmic reticulum, golgi | 73.9 | 74.23 |
| PGSC0003DMT400040718 | Potato | cytosol, endoplasmic reticulum, golgi | 69.74 | 73.27 |
| Solyc05g053790.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 67.98 | 71.59 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 65.35 | 68.51 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 65.13 | 68.28 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 65.35 | 67.27 |
| GSMUA_Achr8P00950_001 | Banana | cytosol, endoplasmic reticulum, golgi | 65.13 | 67.04 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 62.94 | 66.74 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 62.28 | 66.2 |
| GSMUA_Achr8P08790_001 | Banana | endoplasmic reticulum, nucleus, peroxisome | 64.04 | 65.77 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 61.84 | 65.73 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 62.28 | 65.44 |
| KRH42756 | Soybean | extracellular, golgi, plastid | 70.61 | 65.31 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 62.28 | 65.29 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 60.53 | 64.34 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 60.53 | 64.34 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 60.31 | 63.95 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 60.09 | 63.72 |
| GSMUA_Achr7P02740_001 | Banana | endoplasmic reticulum | 65.57 | 61.65 |
| Zm00001d049804_P001 | Maize | plasma membrane | 60.09 | 61.16 |
| Os08t0526100-01 | Rice | plastid | 62.72 | 59.83 |
| Zm00001d021026_P001 | Maize | endoplasmic reticulum | 63.38 | 59.34 |
| EES14210 | Sorghum | cytosol, extracellular, golgi, plastid | 62.28 | 59.29 |
| TraesCS5B01G280700.1 | Wheat | endoplasmic reticulum | 61.84 | 59.0 |
| EER99141 | Sorghum | cytosol, endoplasmic reticulum, golgi, plastid | 63.82 | 58.91 |
| Os09t0504000-01 | Rice | cytosol, endoplasmic reticulum, golgi | 64.04 | 58.63 |
| TraesCS5D01G288700.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 61.84 | 58.63 |
| Zm00001d031577_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome, plastid | 57.68 | 58.44 |
| TraesCS7B01G153900.1 | Wheat | plastid | 62.94 | 58.33 |
| TraesCS5A01G281600.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 61.62 | 58.3 |
| TraesCS7D01G257800.1 | Wheat | plastid | 62.5 | 58.16 |
| TraesCS7A01G256600.1 | Wheat | plastid | 62.5 | 58.16 |
| HORVU7Hr1G053260.2 | Barley | plastid | 62.28 | 57.96 |
| HORVU5Hr1G075660.1 | Barley | plastid | 62.06 | 55.71 |
| CDY47611 | Canola | golgi | 20.83 | 27.3 |
| CDY47846 | Canola | golgi | 20.39 | 27.11 |
| CDY40862 | Canola | cytosol, golgi | 20.61 | 27.09 |
| CDX86828 | Canola | golgi | 20.61 | 27.09 |
| CDY03506 | Canola | cytosol, golgi | 20.61 | 27.01 |
| CDY21065 | Canola | cytosol | 20.61 | 26.78 |
| CDY31278 | Canola | cytosol | 20.61 | 26.78 |
| CDY08378 | Canola | golgi | 20.18 | 26.67 |
| CDY69000 | Canola | cytosol | 19.3 | 26.27 |
| CDY49193 | Canola | cytosol | 20.18 | 26.21 |
| CDY47346 | Canola | cytosol | 20.18 | 26.21 |
| CDY50431 | Canola | cytosol | 19.52 | 25.57 |
| CDY09555 | Canola | mitochondrion | 21.05 | 22.86 |
| CDY02312 | Canola | mitochondrion | 20.61 | 22.38 |
| CDY49498 | Canola | golgi | 20.18 | 22.33 |
| CDY49015 | Canola | golgi | 19.96 | 22.09 |
| CDX82768 | Canola | mitochondrion | 19.74 | 21.9 |
| CDX78998 | Canola | mitochondrion | 19.74 | 21.9 |
| CDY13102 | Canola | golgi | 19.74 | 21.84 |
| CDY29113 | Canola | golgi | 19.74 | 21.84 |
| CDY52524 | Canola | golgi | 19.3 | 20.75 |
| CDY31644 | Canola | golgi | 19.3 | 20.75 |
| CDY71965 | Canola | cytosol, mitochondrion | 10.53 | 20.17 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 18.2 | 19.39 |
| CDY60264 | Canola | plastid | 21.27 | 15.88 |
| CDY49495 | Canola | cytosol | 3.07 | 14.29 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 20.61 | 14.07 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 19.74 | 14.0 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 20.39 | 13.98 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 20.39 | 13.98 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 19.52 | 13.82 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 19.52 | 13.78 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 19.52 | 13.78 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 19.96 | 13.58 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 19.96 | 13.58 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 20.61 | 13.3 |
| CDY72469 | Canola | cytosol | 2.19 | 7.58 |
| CDX81794 | Canola | plastid | 5.7 | 7.49 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.82 | 6.81 |
| CDY71423 | Canola | cytosol, nucleus | 6.36 | 6.73 |
| CDY45969 | Canola | cytosol | 3.73 | 5.72 |
| CDY45471 | Canola | cytosol | 3.73 | 5.72 |
| CDX98052 | Canola | cytosol | 3.73 | 5.26 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078DCW3 | EnsemblPlants:CDX85133 | ProteinID:CDX85133 |
| ProteinID:CDX85133.1 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016857 | GO:GO:0050662 | EnsemblPlantsGene:GSBRNA2T00142670001 | InterPro:NAD(P)-bd_dom_sf |
| InterPro:Nuc_sugar_epim | PFAM:PF01370 | PRINTS:PR01713 | PANTHER:PTHR43574 | PANTHER:PTHR43574:SF10 | SUPFAM:SSF51735 |
| TMHMM:TMhelix | UniParc:UPI0004EAE5FD | SEG:seg | : | : | : |
Description
BnaC07g07730D
Coordinates
chrLK031840:+:1103199..1104771
Molecular Weight (calculated)
50284.0 Da
IEP (calculated)
10.136
GRAVY (calculated)
-0.268
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSATGDTS KTVKLERYNS YLRKIHSTKV LKASSKVLFR ATLLIALVLV LLFAVNYHPH SDSHHLHRRS FLSTGLFSSS SASSSLGGGA AWEKRVRQSS
101: TAKRQHGLSV LVTGAAGFVG SHCSIALRKR GDGVLGFDNF NDYYDPSLKR ARQHLLEKNQ VFIVEGDLND GPLLRKLFDI VPFTHVLHLA AQAGVRYAMK
201: NPQSYISSNI AGLVNLLEVA KAANPQPAIV WASSSSVYGL NTENPFSEEH RTDQPASLYA ATKKAGEEIA HTYNHIYGLS LTGLRFFTVY GPWGRPDMAY
301: FFFTKDILHG KSIDIYRTQD NQEVARDFTY IDDIVKGCVG ALDTAEKSTG SGGKKRGPAQ LRVYNLGNTS PVPVGRLVSI LEGLLGTKAK KHLIKMPRNG
401: DVPYTHANVS LAYRDFGYKP TTDLAAGLRK FVKWYVSYYG IQPRVKKENS HADESA
101: TAKRQHGLSV LVTGAAGFVG SHCSIALRKR GDGVLGFDNF NDYYDPSLKR ARQHLLEKNQ VFIVEGDLND GPLLRKLFDI VPFTHVLHLA AQAGVRYAMK
201: NPQSYISSNI AGLVNLLEVA KAANPQPAIV WASSSSVYGL NTENPFSEEH RTDQPASLYA ATKKAGEEIA HTYNHIYGLS LTGLRFFTVY GPWGRPDMAY
301: FFFTKDILHG KSIDIYRTQD NQEVARDFTY IDDIVKGCVG ALDTAEKSTG SGGKKRGPAQ LRVYNLGNTS PVPVGRLVSI LEGLLGTKAK KHLIKMPRNG
401: DVPYTHANVS LAYRDFGYKP TTDLAAGLRK FVKWYVSYYG IQPRVKKENS HADESA
001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LNASSKVLFR ATLLVALVLV LIFAINYPPL SDSRAAAAHH LHRRSFLSTG LFSSSSSSSS IGGAAWEKRV
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA
Arabidopsis Description
GAE6UDP-glucuronate 4-epimerase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIS3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.