Factsheet for HORVU5Hr1G075660.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23820.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT3G23820.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G280700.1	Wheat	endoplasmic reticulum	89.76	95.4
TraesCS5A01G281600.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	88.58	93.36
TraesCS5D01G288700.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	88.39	93.35
Zm00001d021026_P001	Maize	endoplasmic reticulum	78.15	81.52
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	78.54	80.77
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	77.56	79.12
HORVU7Hr1G053260.2	Barley	plastid	73.62	76.33
GSMUA_Achr8P00950_001	Banana	cytosol, endoplasmic reticulum, golgi	58.66	67.27
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	57.87	66.37
GSMUA_Achr8P08790_001	Banana	endoplasmic reticulum, nucleus, peroxisome	57.09	65.32
KRH58854	Soybean	endoplasmic reticulum, golgi	52.17	63.7
VIT_05s0029g00420.t01	Wine grape	endoplasmic reticulum	56.5	63.64
PGSC0003DMT400053071	Potato	cytosol, endoplasmic reticulum, golgi, plastid	55.71	63.17
Solyc09g092330.1.1	Tomato	nucleus	55.91	62.83
CDX77481	Canola	endoplasmic reticulum	55.71	62.47
Bra014987.1-P	Field mustard	endoplasmic reticulum	55.71	62.33
CDX85133	Canola	endoplasmic reticulum	55.71	62.06
PGSC0003DMT400040718	Potato	cytosol, endoplasmic reticulum, golgi	52.76	61.75
CDY64583	Canola	endoplasmic reticulum	55.91	61.74
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	55.91	61.74
CDY18087	Canola	cytosol, endoplasmic reticulum, golgi	55.91	61.74
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	55.31	61.62
AT3G23820.1	Thale cress	endoplasmic reticulum	55.71	61.52
KRH31569	Soybean	mitochondrion	55.91	61.47
CDX92990	Canola	endoplasmic reticulum	55.12	61.4
CDY53207	Canola	endoplasmic reticulum	54.92	61.32
KRG97348	Soybean	endoplasmic reticulum	52.95	61.28
PGSC0003DMT400011867	Potato	cytosol, endoplasmic reticulum, golgi	54.72	61.23
GSMUA_Achr7P02740_001	Banana	endoplasmic reticulum	57.87	60.62
Solyc05g053790.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	51.18	60.05
HORVU5Hr1G060660.3	Barley	mitochondrion	45.67	59.03
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	51.18	58.69
KRH42756	Soybean	extracellular, golgi, plastid	52.95	54.56
HORVU4Hr1G063010.1	Barley	peroxisome	53.35	52.72
HORVU5Hr1G055920.8	Barley	plastid	16.34	22.19
HORVU7Hr1G074300.2	Barley	golgi	16.73	20.99
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	16.93	20.87
HORVU5Hr1G077110.3	Barley	mitochondrion	17.13	20.67
HORVU5Hr1G080860.10	Barley	mitochondrion	17.13	20.52
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	12.99	17.51
HORVU4Hr1G059120.2	Barley	plastid	18.11	12.72
HORVU5Hr1G007050.2	Barley	plastid	17.32	12.14
HORVU6Hr1G065690.1	Barley	peroxisome, plastid	3.15	5.02

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	UniProt:A0A287RU44	InterPro:Epimerase_deHydtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662	EnsemblPlantsGene:HORVU5Hr1G075660	EnsemblPlants:HORVU5Hr1G075660.1
InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF7
SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI000B461819	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:547622230..547624321

Molecular Weight (calculated)

53913.1 Da

IEP (calculated)

10.367

GRAVY (calculated)

-0.060

Length

508 amino acids

Sequence
(BLAST)

001: PAFPSQPTHS LATLHCTSPT SVRGQPARGA TMPSDAAAKG VKLERYASGS ALLLRRVASG KFVSASSHLL FRATVLATLA LVFLFALHYP SLLSRSFSLA
101: SSSVPSRSHR SLLASSSAAP TYGGERWQKE IRRSAKPRRD GGLSVLVTGA GGFVGAHCSL ALKARGDGVV GLDNFNSYYD PALKRGRQAL LADRGVVVLD
201: ADINDALLLE RLFEAVPFTH VLHLAAQAGV RYAMEAPQTY VASNVAGLVS VFEAAAKHAD PQPAIVWASS SSVYGLNTDA PFSEDHRTDR PASLYAATKK
301: AGEAIAHAYN HIYGLSITGL RFFTVYGPWG RPDMAYFSFA RSIVAGEPIT LYADARRDFT YIDDVVKGCV GALDTAGRST GSARSGKKSG PAPLRVYNLG
401: NTSPVAVTRM VAILEKLLGK KANKRVIAMP SNGDVPFTHA NVSHAAHDFG YRPTTSLDAG LRHFVDWFVH YYNLDIKIAK PATSTSKKPA AASTKKKGSA
501: TSSSAASS

Best Arabidopsis Sequence Match ( AT3G23820.1 )
(BLAST)

001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LNASSKVLFR ATLLVALVLV LIFAINYPPL SDSRAAAAHH LHRRSFLSTG LFSSSSSSSS IGGAAWEKRV
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA

Arabidopsis Description

GAE6UDP-glucuronate 4-epimerase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIS3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.