Factsheet for Bra028348.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, nucleus

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
endoplasmic reticulum 1
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18087	Canola	cytosol, endoplasmic reticulum, golgi	99.78	99.78
CDY64583	Canola	endoplasmic reticulum	99.78	99.78
Bra014987.1-P	Field mustard	endoplasmic reticulum	95.22	96.48
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	94.35	95.18
AT3G23820.1	Thale cress	endoplasmic reticulum	95.0	95.0
VIT_05s0029g00420.t01	Wine grape	endoplasmic reticulum	78.26	79.82
PGSC0003DMT400053071	Potato	cytosol, endoplasmic reticulum, golgi, plastid	75.22	77.23
KRH58854	Soybean	endoplasmic reticulum, golgi	69.57	76.92
Solyc09g092330.1.1	Tomato	nucleus	75.22	76.55
KRH31569	Soybean	mitochondrion	76.52	76.19
KRG97348	Soybean	endoplasmic reticulum	72.17	75.63
PGSC0003DMT400011867	Potato	cytosol, endoplasmic reticulum, golgi	73.91	74.89
PGSC0003DMT400040718	Potato	cytosol, endoplasmic reticulum, golgi	69.13	73.27
Solyc05g053790.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	66.96	71.13
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	65.65	68.17
GSMUA_Achr8P00950_001	Banana	cytosol, endoplasmic reticulum, golgi	65.65	68.17
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	63.7	67.36
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	62.39	66.74
GSMUA_Achr8P08790_001	Banana	endoplasmic reticulum, nucleus, peroxisome	63.91	66.22
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	61.3	65.73
KRH42756	Soybean	extracellular, golgi, plastid	70.22	65.52
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	61.52	65.06
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	60.0	64.34
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	58.48	62.56
GSMUA_Achr7P02740_001	Banana	endoplasmic reticulum	65.65	62.27
Zm00001d049804_P001	Maize	plasma membrane	59.57	61.16
Os08t0526100-01	Rice	plastid	62.39	60.04
Zm00001d021026_P001	Maize	endoplasmic reticulum	63.26	59.75
TraesCS5B01G280700.1	Wheat	endoplasmic reticulum	61.74	59.41
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	63.7	59.31
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	61.74	59.29
TraesCS5D01G288700.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	61.52	58.84
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	63.48	58.63
TraesCS5A01G281600.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	61.3	58.51
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	57.17	58.44
TraesCS7A01G256600.1	Wheat	plastid	62.17	58.37
TraesCS7B01G153900.1	Wheat	plastid	62.39	58.33
TraesCS7D01G257800.1	Wheat	plastid	61.96	58.16
HORVU7Hr1G053260.2	Barley	plastid	61.52	57.76
HORVU5Hr1G075660.1	Barley	plastid	61.74	55.91
Bra035262.1-P	Field mustard	golgi	20.65	27.38
Bra016757.1-P	Field mustard	cytosol	20.87	27.35
Bra027732.1-P	Field mustard	golgi	20.22	27.11
Bra027626.1-P	Field mustard	cytosol	20.65	27.07
Bra013744.1-P	Field mustard	cytosol, golgi	20.43	27.01
Bra019785.1-P	Field mustard	cytosol	19.57	26.87
Bra039253.1-P	Field mustard	cytosol	20.0	26.51
Bra019257.1-P	Field mustard	plastid	20.0	26.44
Bra032409.1-P	Field mustard	mitochondrion	21.09	23.15
Bra027557.1-P	Field mustard	golgi	20.22	22.57
Bra033746.1-P	Field mustard	golgi	20.0	22.33
Bra020917.1-P	Field mustard	golgi, mitochondrion	19.78	22.14
Bra030933.1-P	Field mustard	cytosol	8.04	20.0
Bra005387.1-P	Field mustard	golgi, mitochondrion	19.57	19.82
Bra013466.1-P	Field mustard	mitochondrion	19.78	19.65
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.22	13.98
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.22	13.92
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.0	13.83
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	18.91	13.51
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	19.57	13.43
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	19.57	13.39
Bra019776.1-P	Field mustard	cytosol	3.48	4.98
Bra027005.1-P	Field mustard	cytosol	3.04	4.71

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra028348	EnsemblPlants:Bra028348.1	EnsemblPlants:Bra028348.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	UniProt:M4EHT3	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
InterPro:Nuc_sugar_epim	PFAM:PF16363	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF10	SUPFAM:SSF51735
TMHMM:TMhelix	UniParc:UPI00025437C8	SEG:seg	:	:	:

Description

AT3G23820 (E=6e-225) GAE6 | GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE 6); UDP-glucuronate 4-epimerase/ catalytic

Coordinates

chrA01:-:18330173..18331555

Molecular Weight (calculated)

50571.3 Da

IEP (calculated)

10.092

GRAVY (calculated)

-0.249

Length

460 amino acids

Sequence
(BLAST)

001: MPLSASSADT SKTVKLERYN SYLRKIHSTK VLKASSKVLF RATLLVALVL VLVFAINYHP LSDSHSAASH HLHRRSFLST GIFSSSSSSL GEGAAWEKRV
101: RQSSTPKRPH GLSVLVTGAA GFVGSHCSIA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKNQVFIVEG DLNDGPLLRK LFDVVPFTHV LHLAAQAGVR
201: YAMKNPQSYI SSNIAGLVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKA ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GPAQLRVYNL GNTSPVPVGR LVSILEGLLG SKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK RENSHADDSA

Best Arabidopsis Sequence Match ( AT3G23820.1 )
(BLAST)

001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LNASSKVLFR ATLLVALVLV LIFAINYPPL SDSRAAAAHH LHRRSFLSTG LFSSSSSSSS IGGAAWEKRV
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA

Arabidopsis Description

GAE6UDP-glucuronate 4-epimerase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIS3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.