Factsheet for Bra030933.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	77.3	21.5
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	74.59	21.43
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	77.3	21.41
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	75.14	20.9
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	74.59	20.54
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	74.05	20.45
Bra027732.1-P	Field mustard	golgi	21.08	11.37
Bra016757.1-P	Field mustard	cytosol	21.08	11.11
Bra013744.1-P	Field mustard	cytosol, golgi	20.54	10.92
Bra019257.1-P	Field mustard	plastid	20.54	10.92
Bra035262.1-P	Field mustard	golgi	20.0	10.66
Bra039253.1-P	Field mustard	cytosol	20.0	10.66
Bra027626.1-P	Field mustard	cytosol	20.0	10.54
Bra019785.1-P	Field mustard	cytosol	18.38	10.15
Bra020917.1-P	Field mustard	golgi, mitochondrion	22.16	9.98
Bra032409.1-P	Field mustard	mitochondrion	22.16	9.79
Bra033746.1-P	Field mustard	golgi	21.62	9.71
Bra027557.1-P	Field mustard	golgi	21.62	9.71
Bra013466.1-P	Field mustard	mitochondrion	22.16	8.86
Bra005387.1-P	Field mustard	golgi, mitochondrion	21.62	8.81
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	20.54	8.74
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	20.0	8.62
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	20.0	8.62
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	20.0	8.6
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	20.0	8.51
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	19.46	8.37
Bra014987.1-P	Field mustard	endoplasmic reticulum	20.54	8.37
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	20.0	8.11
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	20.0	8.04
Bra027005.1-P	Field mustard	cytosol	4.86	3.03
Bra019776.1-P	Field mustard	cytosol	4.86	2.8
Os03t0249400-01	Rice	nucleus, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Bra030933.1	EnsemblPlants:Bra030933.1-P	EnsemblPlantsGene:Bra030933	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43000
PANTHER:PTHR43000:SF8	PFAM:PF01370	SUPFAM:SSF51735	UniParc:UPI0002545632	UniProt:M4EQ62	MapMan:35.1

Description

AT1G53500 (E=2e-058) MUM4, RHM2, ATRHM2, ATMUM4 | MUM4 (MUCILAGE-MODIFIED 4); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic

Coordinates

chrA08:+:931059..933214

Molecular Weight (calculated)

20869.6 Da

IEP (calculated)

5.272

GRAVY (calculated)

-0.315

Length

185 amino acids

Sequence
(BLAST)

001: MQEYVATRWY RAPELNGSFF TKTHVDNSFG NSFEFTKNKY FTVLSTVEVY GETDEDAAVG NHEASQLLPI NPYSATKAGV EMLMMAYGRS YGLPVIGNYV
101: YGPNLFPEKI IPKFMLLAMS GKPLPIHGDG SNVRSYFYYE DVAEAFEVVL HKGGVGHVYN IGAEREREKN DWCGEIHLQT VVERS

Best Arabidopsis Sequence Match ( AT1G53500.1 )
(BLAST)

001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT

Arabidopsis Description

RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.