Factsheet for Bra027005.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45969	Canola	cytosol	99.33	99.33
CDY45471	Canola	cytosol	98.99	98.99
AT1G63000.1	Thale cress	cytosol	95.29	94.02
VIT_02s0025g04610.t01	Wine grape	cytosol	86.2	84.77
Bra019776.1-P	Field mustard	cytosol	91.58	84.74
PGSC0003DMT400058533	Potato	cytosol	85.52	84.39
TraesCS6D01G238800.1	Wheat	peroxisome	83.84	83.0
TraesCS6A01G257500.1	Wheat	peroxisome	83.5	82.67
TraesCS6B01G267600.1	Wheat	peroxisome	83.17	82.33
Solyc08g080140.2.1	Tomato	extracellular	82.83	81.73
KRH77471	Soybean	cytosol, endoplasmic reticulum	75.08	80.22
EES07456	Sorghum	cytosol, peroxisome, plastid	82.83	80.13
GSMUA_Achr5P10430_001	Banana	cytosol	81.48	79.08
GSMUA_Achr1P03840_001	Banana	cytosol	80.81	78.43
Zm00001d017601_P001	Maize	extracellular, peroxisome	80.81	78.18
Os02t0678400-01	Rice	plasma membrane	81.14	77.49
HORVU6Hr1G065690.1	Barley	peroxisome, plastid	82.83	77.12
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	79.12	36.49
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	79.8	35.37
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	79.8	35.27
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	78.79	35.19
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	77.78	34.74
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	78.11	34.73
Bra030933.1-P	Field mustard	cytosol	3.03	4.86
Bra019257.1-P	Field mustard	plastid	4.71	4.02
Bra027626.1-P	Field mustard	cytosol	4.71	3.99
Bra019785.1-P	Field mustard	cytosol	4.38	3.88
Bra027732.1-P	Field mustard	golgi	4.38	3.79
Bra039253.1-P	Field mustard	cytosol	4.38	3.75
Bra014987.1-P	Field mustard	endoplasmic reticulum	5.72	3.74
Bra013744.1-P	Field mustard	cytosol, golgi	4.38	3.74
Bra016757.1-P	Field mustard	cytosol	4.38	3.7
Bra035262.1-P	Field mustard	golgi	4.04	3.46
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	5.05	3.45
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	5.05	3.29
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	4.71	3.26
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	4.71	3.22
Bra020917.1-P	Field mustard	golgi, mitochondrion	4.38	3.16
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	4.71	3.04
Bra013466.1-P	Field mustard	mitochondrion	4.71	3.02
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	4.38	3.02
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	4.04	2.8
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	4.04	2.79
Bra033746.1-P	Field mustard	golgi	3.7	2.67
Bra027557.1-P	Field mustard	golgi	3.7	2.67
Bra005387.1-P	Field mustard	golgi, mitochondrion	3.7	2.42
Bra032409.1-P	Field mustard	mitochondrion	3.37	2.39

Protein Annotations

EnsemblPlants:Bra027005.1	EnsemblPlants:Bra027005.1-P	EnsemblPlantsGene:Bra027005	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:RmlD-like-bd
PANTHER:PTHR10366	PANTHER:PTHR10366:SF405	PFAM:PF04321	SUPFAM:SSF51735	UniParc:UPI00025424F5	UniProt:M4EDZ5
MapMan:3.13.6.1	:	:	:	:	:

Description

AT1G63000 (E=2e-164) NRS/ER, UER1 | NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ dTDP-4-dehydrorhamnose 3,5-epimerase/ dTDP-4-dehydrorhamnose reductase

Coordinates

chrA09:-:7501292..7502662

Molecular Weight (calculated)

33178.7 Da

IEP (calculated)

6.157

GRAVY (calculated)

-0.227

Length

297 amino acids

Sequence
(BLAST)

001: MGAEANASFN FLIYGRTGWI GGLLGKLCEA QGISYTYGSG RLQDRQSIVA DIETVKPTHV FNAAGVTGRP NVDWCESHKV ETIRTNVAGT LTLADICREK
101: GLVLINYATG CIFEYDSGHP LGSGVGFKEE DTPNFTGSFY SKTKAMVEEL LKNYENVCTL RVRMPISSDL SNPRNFITKI ARYEKVVDIP NSMTILDELL
201: PISIDMAKRN LTGIYNFTNP GVVSHNEILE MYREYIDPSF TWKNFTLEEQ AKVIVAPRSN NELDATKLKT EFPEMLSIKE SLIKFVFEPN KKTGVKA

Best Arabidopsis Sequence Match ( AT1G63000.1 )
(BLAST)

001: MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A

Arabidopsis Description

NRS/ERBifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.