Factsheet for Bra016757.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
golgi 2
plastid 1
mitochondrion 1
peroxisome 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31278	Canola	cytosol	99.43	99.43
CDY21065	Canola	cytosol	99.15	99.15
Bra019785.1-P	Field mustard	cytosol	88.03	92.24
Bra027626.1-P	Field mustard	cytosol	90.03	90.03
Bra039253.1-P	Field mustard	cytosol	86.04	87.03
KRH59827	Soybean	extracellular, golgi	85.75	86.0
KRH41129	Soybean	nucleus	84.62	84.86
VIT_02s0025g04210.t01	Wine grape	cytosol	84.05	84.29
PGSC0003DMT400007898	Potato	cytosol	79.2	79.2
Solyc08g080570.2.1	Tomato	cytosol	79.2	79.2
GSMUA_Achr1P18740_001	Banana	cytosol	79.77	79.1
GSMUA_Achr5P13620_001	Banana	cytosol	77.21	77.21
KXG36042	Sorghum	cytosol	73.5	70.88
Zm00001d021249_P003	Maize	cytosol	72.36	69.97
TraesCS5B01G315700.1	Wheat	cytosol	71.79	68.48
TraesCS5A01G314800.1	Wheat	cytosol	71.51	68.21
TraesCS5D01G321100.1	Wheat	cytosol	71.23	67.75
Bra019257.1-P	Field mustard	plastid	66.38	66.95
Bra013744.1-P	Field mustard	cytosol, golgi	66.1	66.67
Bra035262.1-P	Field mustard	golgi	65.81	66.57
Bra027732.1-P	Field mustard	golgi	64.67	66.18
Os09t0526700-01	Rice	cytosol	67.81	63.81
HORVU5Hr1G080860.10	Barley	mitochondrion	71.23	58.96
Bra032409.1-P	Field mustard	mitochondrion	39.89	33.41
Bra027557.1-P	Field mustard	golgi	39.03	33.25
Bra033746.1-P	Field mustard	golgi	38.75	33.01
Bra020917.1-P	Field mustard	golgi, mitochondrion	37.89	32.36
Bra005387.1-P	Field mustard	golgi, mitochondrion	38.18	29.52
Bra013466.1-P	Field mustard	mitochondrion	38.18	28.94
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	27.35	22.38
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	26.78	21.91
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	26.78	21.61
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	26.21	21.4
Bra030933.1-P	Field mustard	cytosol	11.11	21.08
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.93	20.92
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	27.35	20.87
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	27.07	20.83
Bra014987.1-P	Field mustard	endoplasmic reticulum	26.78	20.7
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.36	20.7
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	25.07	13.13
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	24.79	12.95
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	24.22	12.72
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.93	12.63
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.93	12.63
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	22.79	12.42
Bra027005.1-P	Field mustard	cytosol	3.7	4.38
Bra019776.1-P	Field mustard	cytosol	3.42	3.74

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra016757
EnsemblPlants:Bra016757.1	EnsemblPlants:Bra016757.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975
GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	UniProt:M4DJS9	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF9	SUPFAM:SSF51735	TIGRFAMs:TIGR01179
InterPro:UDP_G4E	UniParc:UPI0002546039	:	:	:	:

Description

AT1G12780 (E=9e-199) UGE1 | UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1); UDP-glucose 4-epimerase/ protein dimerization

Coordinates

chrA08:+:19826433..19828291

Molecular Weight (calculated)

39141.9 Da

IEP (calculated)

6.874

GRAVY (calculated)

-0.364

Length

351 amino acids

Sequence
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKEG FKVSIIDNLD NSVIEAVDRV RELVGPDLSK KLEFTQGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: GNPRRYFDNN LVGTINLYET MAKHNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQAAEPEWR IVLLRYFNPV GAHESGRIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF DDPKIGCTAY NLGTGRGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVE EMCRDQWNWA NNNPWGYQKK L

Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L

Arabidopsis Description

UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.