Factsheet for Bra000385.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
endoplasmic reticulum 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67756	Canola	cytosol, endoplasmic reticulum, golgi, plastid	99.77	99.77
CDX95646	Canola	cytosol, endoplasmic reticulum, golgi, plastid	99.31	99.31
AT2G45310.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	93.33	92.91
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	82.99	83.95
VIT_15s0048g00340.t01	Wine grape	endoplasmic reticulum, plastid	83.22	83.6
VIT_15s0048g00330.t01	Wine grape	plastid	81.84	83.37
VIT_15s0048g00320.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, mitochondrion	81.61	76.34
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	71.72	72.73
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	72.64	72.64
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	66.9	67.83
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	66.21	66.98
Bra014987.1-P	Field mustard	endoplasmic reticulum	68.51	65.64
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	68.05	64.91
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	67.36	63.7
Bra013744.1-P	Field mustard	cytosol, golgi	20.92	26.15
Bra019785.1-P	Field mustard	cytosol	20.0	25.97
Bra016757.1-P	Field mustard	cytosol	20.92	25.93
Bra027626.1-P	Field mustard	cytosol	20.69	25.64
Bra027732.1-P	Field mustard	golgi	19.77	25.07
Bra039253.1-P	Field mustard	cytosol	20.0	25.07
Bra035262.1-P	Field mustard	golgi	20.0	25.07
Bra019257.1-P	Field mustard	plastid	19.77	24.71
Bra033746.1-P	Field mustard	golgi	20.23	21.36
Bra032409.1-P	Field mustard	mitochondrion	20.46	21.24
Bra020917.1-P	Field mustard	golgi, mitochondrion	19.77	20.92
Bra027557.1-P	Field mustard	golgi	19.54	20.63
Bra030933.1-P	Field mustard	cytosol	8.74	20.54
Bra005387.1-P	Field mustard	golgi, mitochondrion	20.0	19.16
Bra013466.1-P	Field mustard	mitochondrion	20.23	19.01
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	21.61	13.99
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	21.38	13.88
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.15	13.83
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.15	13.83
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.15	13.77
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	19.77	13.35
Bra019776.1-P	Field mustard	cytosol	3.91	5.3
Bra027005.1-P	Field mustard	cytosol	3.45	5.05

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra000385	EnsemblPlants:Bra000385.1	EnsemblPlants:Bra000385.1-P
InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016857	GO:GO:0050662	UniProt:M4C857	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim
PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF22	SUPFAM:SSF51735	TMHMM:TMhelix
UniParc:UPI000253FE40	SEG:seg	:	:	:	:

Description

AT2G45310 (E=3e-221) GAE4 | GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4); binding / catalytic/ coenzyme binding / racemase and epimerase, acting on carbohydrates and derivatives

Coordinates

chrA03:+:10859386..10860693

Molecular Weight (calculated)

48032.7 Da

IEP (calculated)

10.469

GRAVY (calculated)

-0.217

Length

435 amino acids

Sequence
(BLAST)

001: MSRLDDIPSS PGKFKIDKSS YFNRLRFQSS PIKFAFISFF LLCLISLLFL RSPPSVNSSQ SDPSRRSLRT FTYGGPAWEK RIRASARTRT SSNGMTVLVT
101: GAAGFVGTHV SSALKRRGDG VIGLDNFNDY YDPSLKRARQ ALLERSGVFI VEGDINDVEL LRKLFKIVSF THVMHLAAQA GVRYAMENPG SYVHSNIAGL
201: VNLLEVCKAA NPQPAIVWAS SSSVYGLNTK VPFSEKDRTD QPASLYAATK KAGEEIAHTY NHIYGLSLTG LRFFTVYGPW GRPDMAYFFF TKDILKGKSI
301: SIFESANHGT VARDFTYIDD IVKGCLGALD TAEKSTGTGG KKRGPAQLRV FNLGNTSPVP VSDLVSILER QLKVKAKKNV IKMPRNGDVP FTHANISLAQ
401: RELGYKPTTD LQTGLKKFVR WYLSYYSGGK KAAAR

Best Arabidopsis Sequence Match ( AT2G45310.1 )
(BLAST)

001: MSRLDDIPSS PGKFKMEKSS YLHRLRFQSS LTKFAFFSFF LLCLISLLFL RSPPSINPSS PSDPSRRSLR TNTYGGPAWE KRLRSSARIR TSTNNGITVL
101: VTGAAGFVGT HVSAALKRRG DGVIGLDNFN DYYDPSLKRA RRALLERSGI FIVEGDINDV ELLRKLFKIV SFTHVMHLAA QAGVRYAMEN PSSYVHSNIA
201: GFVNLLEICK SVNPQPAIVW ASSSSVYGLN TKVPFSEKDK TDQPASLYAA TKKAGEEIAH TYNHIYGLSL TGLRFFTVYG PWGRPDMAYF FFTKDILKGK
301: SISIFESANH GTVARDFTYI DDIVKGCLAA LDTAEKSTGS GGKKRGPAQL RVFNLGNTSP VPVSDLVRIL ERQLKVKAKK NLIKMPRNGD VPFTHANISL
401: AQRELGYKPT TDLQTGLKKF VRWYLSYYSG DKKAAAR

Arabidopsis Description

GAE4UDP-glucuronate 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:O22141]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.