Factsheet for AT2G45310.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi, plastid
Any Predictor:	cytosol, endoplasmic reticulum, golgi, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67756	Canola	cytosol, endoplasmic reticulum, golgi, plastid	93.14	93.56
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	92.91	93.33
CDX95646	Canola	cytosol, endoplasmic reticulum, golgi, plastid	92.68	93.1
VIT_15s0048g00340.t01	Wine grape	endoplasmic reticulum, plastid	83.52	84.3
AT4G00110.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	82.84	84.19
VIT_15s0048g00330.t01	Wine grape	plastid	82.15	84.07
AT1G02000.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	82.61	83.18
VIT_15s0048g00320.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, mitochondrion	82.15	77.2
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	72.08	72.25
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	66.82	68.07
AT3G23820.1	Thale cress	endoplasmic reticulum	65.9	62.61
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	21.51	26.78
AT1G63180.1	Thale cress	cytosol	21.05	26.21
AT4G23920.1	Thale cress	cytosol	20.37	25.43
AT4G10960.1	Thale cress	golgi	19.91	24.79
AT1G64440.1	Thale cress	cytosol, golgi	18.76	23.56
AT4G20460.1	Thale cress	golgi, mitochondrion	20.14	21.41
AT1G30620.4	Thale cress	golgi, mitochondrion	20.37	21.24
AT5G44480.1	Thale cress	mitochondrion	19.45	19.5
AT2G34850.2	Thale cress	cytosol	10.3	19.07
AT3G14790.2	Thale cress	mitochondrion	21.28	13.94
AT1G78570.1	Thale cress	cytosol, mitochondrion, peroxisome	21.28	13.9
AT1G53500.1	Thale cress	cytosol, extracellular, peroxisome	21.05	13.79
AT3G28530.1	Thale cress	cytosol, nucleus	0.69	12.0
AT1G63000.1	Thale cress	cytosol	3.43	4.98

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:819139	ProteinID:AAB82632.1	ProteinID:AEC10537.1
ArrayExpress:AT2G45310	EnsemblPlantsGene:AT2G45310	RefSeq:AT2G45310	TAIR:AT2G45310	RefSeq:AT2G45310-TAIR-G	EnsemblPlants:AT2G45310.1
TAIR:AT2G45310.1	EMBL:AY594693	Unigene:At.66419	EMBL:BT004225	EMBL:BT005652	InterPro:Epimerase_deHydtase
Symbol:GAE4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0016857	GO:GO:0032580	GO:GO:0050378
GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_182056.1	InterPro:Nuc_sugar_epim	UniProt:O22141	PFAM:PF01370
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009049	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR01713
PANTHER:PTHR43574	PANTHER:PTHR43574:SF22	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI000000C2F2	SEG:seg

Description

GAE4UDP-glucuronate 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:O22141]

Coordinates

chr2:+:18682081..18684042

Molecular Weight (calculated)

48538.4 Da

IEP (calculated)

10.496

GRAVY (calculated)

-0.242

Length

437 amino acids

Sequence
(BLAST)

001: MSRLDDIPSS PGKFKMEKSS YLHRLRFQSS LTKFAFFSFF LLCLISLLFL RSPPSINPSS PSDPSRRSLR TNTYGGPAWE KRLRSSARIR TSTNNGITVL
101: VTGAAGFVGT HVSAALKRRG DGVIGLDNFN DYYDPSLKRA RRALLERSGI FIVEGDINDV ELLRKLFKIV SFTHVMHLAA QAGVRYAMEN PSSYVHSNIA
201: GFVNLLEICK SVNPQPAIVW ASSSSVYGLN TKVPFSEKDK TDQPASLYAA TKKAGEEIAH TYNHIYGLSL TGLRFFTVYG PWGRPDMAYF FFTKDILKGK
301: SISIFESANH GTVARDFTYI DDIVKGCLAA LDTAEKSTGS GGKKRGPAQL RVFNLGNTSP VPVSDLVRIL ERQLKVKAKK NLIKMPRNGD VPFTHANISL
401: AQRELGYKPT TDLQTGLKKF VRWYLSYYSG DKKAAAR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.