Factsheet for AT3G14790.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97601	Canola	cytosol, mitochondrion, plastid	92.65	95.67
CDX98494	Canola	cytosol, mitochondrion, plastid	92.5	95.51
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	95.2	95.49
CDY20084	Canola	cytosol, mitochondrion, peroxisome	91.3	94.57
CDY32340	Canola	cytosol, mitochondrion, peroxisome	91.0	94.4
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	90.7	93.94
AT1G53500.1	Thale cress	cytosol, extracellular, peroxisome	91.45	91.45
GSMUA_Achr4P10430_001	Banana	cytosol, extracellular, mitochondrion	84.86	87.21
AT1G78570.1	Thale cress	cytosol, mitochondrion, peroxisome	86.06	85.8
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	79.76	83.65
GSMUA_Achr3P31810_001	Banana	cytosol, mitochondrion, peroxisome	77.66	83.41
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	83.96	83.33
Os03t0278200-01	Rice	nucleus, plasma membrane	83.96	82.96
EER95086	Sorghum	cytosol, mitochondrion, plastid	83.21	82.59
TraesCS4A01G099200.1	Wheat	cytosol	83.36	82.37
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	82.91	82.29
TraesCS4D01G206000.1	Wheat	mitochondrion	83.36	81.52
Zm00001d028654_P002	Maize	cytosol	82.01	81.4
TraesCS4B01G205100.3	Wheat	mitochondrion	83.21	81.38
VIT_04s0069g00830.t01	Wine grape	cytosol, mitochondrion, plastid	77.21	78.39
AT1G63000.1	Thale cress	cytosol	35.08	77.74
PGSC0003DMT400075973	Potato	cytosol, mitochondrion, peroxisome	75.41	76.91
GSMUA_Achr3P31820_001	Banana	cytosol, mitochondrion, plastid	69.72	76.86
HORVU4Hr1G059120.2	Barley	plastid	83.21	76.76
Solyc08g069110.2.1	Tomato	unclear	74.66	76.5
KRH04933	Soybean	cytosol, mitochondrion, plastid	73.01	75.62
KRH16155	Soybean	cytosol	73.91	75.27
AT1G64440.1	Thale cress	cytosol, golgi	13.04	25.0
AT4G23920.1	Thale cress	cytosol	12.74	24.29
AT1G63180.1	Thale cress	cytosol	12.74	24.22
AT4G10960.1	Thale cress	golgi	12.44	23.65
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	12.44	23.65
AT4G00110.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	14.24	22.09
AT4G20460.1	Thale cress	golgi, mitochondrion	13.49	21.9
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	14.24	21.79
AT1G02000.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	14.09	21.66
AT2G34850.2	Thale cress	cytosol	7.65	21.61
AT2G45310.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	13.94	21.28
AT1G30620.4	Thale cress	golgi, mitochondrion	13.34	21.24
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	13.49	20.98
AT3G23820.1	Thale cress	endoplasmic reticulum	14.09	20.43
AT5G44480.1	Thale cress	mitochondrion	12.74	19.5
AT3G28530.1	Thale cress	cytosol, nucleus	0.45	12.0

Protein Annotations

MapMan:3.13.6.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:820707	UniProt:A0A1I9LN83	ProteinID:AEE75567.1
ProteinID:ANM64041.1	ArrayExpress:AT3G14790	EnsemblPlantsGene:AT3G14790	RefSeq:AT3G14790	TAIR:AT3G14790	RefSeq:AT3G14790-TAIR-G
EnsemblPlants:AT3G14790.2	EMBL:AY078958	EMBL:AY142060	Unigene:At.27812	ProteinID:BAB02645.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009987
GO:GO:0010253	GO:GO:0010280	GO:GO:0016491	GO:GO:0016829	GO:GO:0016853	GO:GO:0050377
GO:GO:0055114	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_001326092.1	RefSeq:NP_188097.1	PFAM:PF04321
PFAM:PF16363	PANTHER:PTHR43000	PANTHER:PTHR43000:SF8	Symbol:RHM3	InterPro:RmlD-like-bd	SUPFAM:SSF51735
UniParc:UPI00084851B6	SEG:seg	:	:	:	:

Description

RHM3Rhamnose biosynthesis 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN83]

Coordinates

chr3:+:4964105..4967075

Molecular Weight (calculated)

75290.7 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.404

Length

667 amino acids

Sequence
(BLAST)

001: MLQMATYKPK NILITGAAGF IASHVANRLV RSYPDYKIVV LDKLDYCSNL KNLNPSKSSP NFKFVKGDIA SADLVNYLLI TEEIDTIMHF AAQTHVDNSF
101: GNSFEFTKNN IYGTHVLLEA CKVTGQIRRF IHVSTDEVYG ETDEDASVGN HEASQLLPTN PYSATKAGAE MLVMAYGRSY GLPVITTRGN NVYGPNQFPE
201: KLIPKFILLA MNGKPLPIHG DGSNVRSYLY CEDVAEAFEV VLHKGEVNHV YNIGTTRERR VIDVANDISK LFGIDPDSTI QYVENRPFND QRYFLDDQKL
301: KKLGWCERTN WEEGLRKTME WYTENPEWWG DVSGALLPHP RMLMMPGDRH SDGSDEHKNA DGNQTFTVVT PTKAGCSGDK RSLKFLIYGK TGWLGGLLGK
401: LCEKQGIPYE YGKGRLEDRA SLIADIRSIK PSHVFNAAGL TGRPNVDWCE SHKTETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD AAHPEGSGIG
501: FKEEDKPNFT GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VNIPNSMTIL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKSYI EPDFKWSNFN LEEQAKVIVA PRSNNEMDGA KLSKEFPEML SIKDSLIKYV FEPNKRT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.