Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G28530.1 | Thale cress | cytosol, nucleus | 7.14 | 100.0 |
| Bra019257.1-P | Field mustard | plastid | 94.57 | 95.11 |
| CDY03506 | Canola | cytosol, golgi | 93.71 | 94.25 |
| CDY47611 | Canola | golgi | 93.43 | 93.97 |
| Bra013744.1-P | Field mustard | cytosol, golgi | 93.14 | 93.68 |
| CDY50431 | Canola | cytosol | 92.86 | 93.39 |
| AT4G10960.1 | Thale cress | golgi | 88.57 | 88.32 |
| AT1G64440.1 | Thale cress | cytosol, golgi | 79.14 | 79.6 |
| Solyc12g055930.1.1 | Tomato | cytosol, extracellular, golgi | 78.57 | 79.02 |
| PGSC0003DMT400012829 | Potato | cytosol, extracellular, golgi | 78.29 | 78.74 |
| GSMUA_Achr9P00170_001 | Banana | extracellular, golgi | 76.86 | 77.08 |
| GSMUA_Achr6P22620_001 | Banana | golgi, mitochondrion | 76.57 | 76.79 |
| GSMUA_Achr5P09200_001 | Banana | golgi | 77.43 | 76.34 |
| GSMUA_Achr4P02670_001 | Banana | golgi | 75.43 | 75.64 |
| HORVU5Hr1G055920.8 | Barley | plastid | 72.86 | 68.18 |
| TraesCS5A01G183100.1 | Wheat | plastid | 72.86 | 68.0 |
| TraesCS5B01G181300.1 | Wheat | plastid | 72.86 | 68.0 |
| TraesCS5D01G188200.1 | Wheat | plastid | 72.86 | 68.0 |
| Os09t0323000-01 | Rice | cytosol | 71.14 | 67.48 |
| EER98731 | Sorghum | plastid | 70.29 | 67.21 |
| Zm00001d005598_P001 | Maize | plastid | 70.0 | 67.12 |
| AT1G12780.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 64.86 | 64.67 |
| Zm00001d020093_P002 | Maize | golgi | 55.14 | 63.91 |
| AT1G63180.1 | Thale cress | cytosol | 64.0 | 63.82 |
| GSMUA_Achr8P27530_001 | Banana | cytosol, golgi, plastid | 76.29 | 62.97 |
| Os08t0374800-01 | Rice | golgi | 71.71 | 61.52 |
| GSMUA_Achr3P16370_001 | Banana | golgi, mitochondrion, plastid | 74.57 | 60.28 |
| Zm00001d032346_P002 | Maize | endoplasmic reticulum, golgi, plastid | 72.0 | 59.57 |
| EES14924 | Sorghum | endoplasmic reticulum, golgi, plastid | 72.0 | 59.57 |
| GSMUA_Achr9P06140_001 | Banana | plastid | 75.71 | 50.86 |
| GSMUA_Achr6P26620_001 | Banana | plastid | 75.71 | 49.35 |
| AT2G34850.2 | Thale cress | cytosol | 28.0 | 41.53 |
| AT1G30620.4 | Thale cress | golgi, mitochondrion | 42.57 | 35.56 |
| AT4G20460.1 | Thale cress | golgi, mitochondrion | 41.71 | 35.52 |
| AT5G44480.1 | Thale cress | mitochondrion | 41.71 | 33.49 |
| AT4G12250.1 | Thale cress | cytosol, endoplasmic reticulum, golgi | 26.57 | 21.33 |
| AT4G00110.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 26.0 | 21.16 |
| AT1G02000.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 25.71 | 20.74 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 25.14 | 20.51 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 26.86 | 20.43 |
| AT2G45310.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 25.43 | 20.37 |
| AT1G78570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 24.86 | 13.0 |
| AT3G14790.2 | Thale cress | mitochondrion | 24.29 | 12.74 |
| AT1G53500.1 | Thale cress | cytosol, extracellular, peroxisome | 24.0 | 12.59 |
| AT1G63000.1 | Thale cress | cytosol | 3.43 | 3.99 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | MapMan:3.13.8 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | EntrezGene:828492 |
| ProteinID:AEE84827.1 | EMBL:AK118722 | ArrayExpress:AT4G23920 | EnsemblPlantsGene:AT4G23920 | RefSeq:AT4G23920 | TAIR:AT4G23920 |
| RefSeq:AT4G23920-TAIR-G | EnsemblPlants:AT4G23920.1 | TAIR:AT4G23920.1 | EMBL:AY084615 | EMBL:BT008539 | ProteinID:CAB43892.1 |
| ProteinID:CAB81310.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003978 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005975 | GO:GO:0006012 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016853 | GO:GO:0042546 | GO:GO:0071555 |
| InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_194123.1 | PFAM:PF16363 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0006020 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020123 | PO:PO:0020131 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR43725 | PANTHER:PTHR43725:SF11 | UniProt:Q9T0A7 | SUPFAM:SSF51735 | TIGRFAMs:TIGR01179 |
| InterPro:UDP_G4E | Symbol:UGE2 | UniParc:UPI0000004207 | SEG:seg | : | : |
Description
UGE2UDP-glucose 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A7]
Coordinates
chr4:+:12431097..12433912
Molecular Weight (calculated)
38384.5 Da
IEP (calculated)
6.717
GRAVY (calculated)
-0.273
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSVLVTGG AGYIGSHTVL QLLEGGYSAV VVDNYDNSSA ASLQRVKKLA GENGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.