Factsheet for Os08t0374800-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
golgi 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0374800-01
Os09t0323000-01
Os09t0526700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23920.1	Os09t0526700-01	AT1G12780.1	21798944
AT4G23920.1	Os08t0374800-01	AT4G10960.1	21798944
AT4G23920.1	Os09t0323000-01	AT4G10960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	88.97	85.82
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	87.99	84.87
Os09t0323000-01	Rice	cytosol	74.75	82.66
GSMUA_Achr4P02670_001	Banana	golgi	65.93	77.08
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	64.95	75.93
GSMUA_Achr5P09200_001	Banana	golgi	65.93	75.77
Os05t0595100-01	Rice	plastid	65.69	75.71
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	63.97	74.79
Bra027732.1-P	Field mustard	golgi	61.76	73.47
CDY47846	Canola	golgi	61.76	73.47
CDY08378	Canola	golgi	61.76	73.04
AT1G64440.1	Thale cress	cytosol, golgi	62.25	72.99
AT4G10960.1	Thale cress	golgi	62.75	72.93
CDY47611	Canola	golgi	62.01	72.7
Bra013744.1-P	Field mustard	cytosol, golgi	61.76	72.41
CDY03506	Canola	cytosol, golgi	61.76	72.41
Bra019257.1-P	Field mustard	plastid	61.52	72.13
CDY40862	Canola	cytosol, golgi	61.27	72.05
CDX86828	Canola	golgi	61.03	71.76
Bra035262.1-P	Field mustard	golgi	61.03	71.76
AT4G23920.1	Thale cress	cytosol	61.52	71.71
CDY50431	Canola	cytosol	60.78	71.26
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	60.54	70.98
PGSC0003DMT400012829	Potato	cytosol, extracellular, golgi	60.54	70.98
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	64.71	62.26
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	63.73	60.05
Os09t0526700-01	Rice	cytosol	54.17	59.25
GSMUA_Achr9P06140_001	Banana	plastid	65.44	51.25
GSMUA_Achr6P26620_001	Banana	plastid	65.69	49.91
Os04t0618200-02	Rice	golgi	37.99	39.64
Os08t0129700-01	Rice	mitochondrion	37.75	37.93
Os07t0139400-01	Rice	plasma membrane	38.48	37.29
Os06t0187200-01	Rice	golgi, peroxisome	18.38	24.27
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	22.06	20.59
Os08t0526100-01	Rice	plastid	23.77	20.29
Os03t0249500-01	Rice	plastid	23.28	19.63
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	23.28	19.08
Os03t0278200-01	Rice	nucleus, plasma membrane	21.81	13.19
Os05t0203400-00	Rice	plastid	10.29	12.57
Os02t0678400-01	Rice	plasma membrane	2.94	3.86
Os03t0249400-01	Rice	nucleus, plasma membrane	0.25	0.79

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:4345415
EMBL:AB096863	EMBL:AK066269	ProteinID:BAD05280.1	ProteinID:BAF23582.1	ProteinID:BAT05183.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152
GO:GO:0016853	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os08g0374800	EnsemblPlants:Os08t0374800-01	PFAM:PF16363
PANTHER:PTHR43725	PANTHER:PTHR43725:SF5	UniProt:Q6ZDJ7	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E
UniParc:UPI000022F1BE	RefSeq:XP_015650590.1	:	:	:	:

Description

UDP-glucose epimerase 2Similar to UDP-galactose 4-epimerase-like protein. (Os08t0374800-01)

Coordinates

chr8:-:17570086..17576402

Molecular Weight (calculated)

44162.5 Da

IEP (calculated)

8.611

GRAVY (calculated)

-0.284

Length

408 amino acids

Sequence
(BLAST)

001: MAVEKTVPGG VRTVLVTGGA GYIGSHAVLQ LLLAGFRAVV VDNLNNSSEL AVRRVAALAG DHSRNLAFHK VDLRDKGALE KVFASTRFDA VVHFAGLKAV
101: GESVQKPLLY YDNNVNGTVN LLEVMSAHGC KKLVFSSSAA VYGSPKNSPC TEEFPLTPNN PYGKTKLVVE DICRDIYRTD PEWKIILLRY FNPVGAHPSG
201: YLGEDPCGIP NNLMPYVQQV AVGRRPALTI LGNDYATRDG TGVRDYIHVV DLADGHIAAL QKLFESSSIG CEAYNLGTGK GTSVLEIVKA FEKASGKKIP
301: LIIGPRRPGD AEILFSLPAK AEKELNWKAK FGIDEMCRDQ WNWASKNPYG YGSLDSTKQN GHHSYGSIGS PKQNGHCTNG FSESTRHNGH NGYGLVDSAK
401: HNGNGHFH

Best Arabidopsis Sequence Match ( AT4G10960.1 )
(BLAST)

001: MMARNVLVSG GAGYIGSHTV LQLLLGGYSV VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRSA LEKIFSETKF DAVIHFAGLK AVGESVEKPL
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H

Arabidopsis Description

UGE5UDP-glucose 4-epimerase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN58]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.