Factsheet for Os03t0249500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G224000.1	Wheat	plastid	91.94	92.32
TraesCS4A01G080300.1	Wheat	plastid	90.7	91.84
EER95171	Sorghum	plastid	90.7	91.46
Zm00001d028427_P001	Maize	plastid	90.29	91.23
TraesCS4B01G223700.1	Wheat	plastid	91.74	90.43
Zm00001d047915_P001	Maize	plastid	88.43	89.35
HORVU4Hr1G063010.1	Barley	peroxisome	90.91	85.6
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	35.12	72.03
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	63.02	70.93
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	67.15	70.81
Os06t0187200-01	Rice	golgi, peroxisome	44.63	69.9
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	60.12	66.74
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	59.92	66.67
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	53.31	66.49
CDX94504	Canola	cytosol, endoplasmic reticulum, peroxisome	59.71	66.44
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	58.88	66.43
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	59.5	66.36
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	59.5	66.21
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	58.68	66.2
CDY04398	Canola	cytosol, endoplasmic reticulum, golgi	58.68	66.2
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	58.68	66.05
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	58.47	65.97
PGSC0003DMT400059215	Potato	plastid	30.17	65.47
VIT_16s0022g01450.t01	Wine grape	mitochondrion	53.93	63.97
KRH40009	Soybean	plastid	53.31	63.39
Solyc08g079440.1.1	Tomato	nucleus	55.99	60.9
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	54.55	60.41
PGSC0003DMT400010106	Potato	cytosol, endoplasmic reticulum, golgi, plastid	55.37	60.09
Os08t0526100-01	Rice	plastid	55.17	55.86
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	55.17	53.61
Os05t0595100-01	Rice	plastid	18.8	25.71
Os09t0323000-01	Rice	cytosol	19.42	25.47
Os08t0374800-01	Rice	golgi	19.63	23.28
Os09t0526700-01	Rice	cytosol	17.77	23.06
Os08t0129700-01	Rice	mitochondrion	19.01	22.66
Os04t0618200-02	Rice	golgi	17.98	22.25
Os07t0139400-01	Rice	plasma membrane	17.36	19.95
Os05t0203400-00	Rice	plastid	9.5	13.77
Os03t0278200-01	Rice	nucleus, plasma membrane	19.01	13.63
Os03t0249400-01	Rice	nucleus, plasma membrane	1.24	4.72
Os02t0678400-01	Rice	plasma membrane	2.27	3.54

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:4332258	ProteinID:ABF94977.1	EMBL:AK121154
ProteinID:BAF11475.1	ProteinID:BAS83276.1	EMBL:DQ333338	ProteinID:EAZ26277.1	InterPro:Epimerase_deHydtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim
EnsemblPlantsGene:Os03g0249500	EnsemblPlants:Os03t0249500-01	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF22
UniProt:Q2MJA7	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI000067D93C	RefSeq:XP_015628152.1	SEG:seg

Description

UDP-glucuronic acid 4-epimerase 1Similar to Nucleotide sugar epimerase-like protein (UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6). (Os03t0249500-01)

Coordinates

chr3:+:7889338..7891292

Molecular Weight (calculated)

51949.0 Da

IEP (calculated)

10.639

GRAVY (calculated)

-0.178

Length

484 amino acids

Sequence
(BLAST)

001: MAPQLTGAPG TAGAAGGAAS VKPQFHHFHH HRLATRHHHP SPTSLLSKLA FWSVCSLSLL LAFLLLSPSA APAPRAAPDS PRRSLHTSSP SAAATWGGAA
101: WEKKVRASAR VRRANGRGLT VLVTGAAGFV GCHAAAALRR RGDGVLGLDN FNDYYDPALK RGRAALLARS GVYVVDGDIA DAELLAKLFD VVPFTHVLHL
201: AAQAGVRHAL VDPMSYVRAN VGGFVALLEA ARMANPQPAI VWASSSSVYG LNSHVPFSEH DRTDRPASLY AATKKAGEEI AHAYNHIYGL SLTALRFFTV
301: YGPWGRPDMA YFFFTRDILA GRPITVYESA GGGTHQTTIS RDFTYIDDIV KGCVGALDTA GRSTGSGGKK RGPAPFRTYN LGNTSPVPVT QLVDLLEKLL
401: KVKAVRKIVK MPRNGDVPYT HANISLAQRE LGYRPSTDLQ TGVKKFVRWY LEYYMPGFAG KQKQHGSSNS KSSRGRSGNT SSAR

Best Arabidopsis Sequence Match ( AT1G02000.1 )
(BLAST)

001: MSHLDDIPST PGKFKMMDKS PFFLHRTRWQ SSVAKLAFWS LVFFGLLFIF FYRSPISNPD SSRRSLRTYS WGGPAWEKRV RSSARVRTRN GVSVLVTGAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA

Arabidopsis Description

GAE2UDP-glucuronate 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC1]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.