CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid

Predictor Summary:

plastid 3
cytosol 1
endoplasmic reticulum 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	97.44	97.21
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	42.19	76.69
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	76.69	75.46
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	74.59	74.59
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	74.59	74.59
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	67.13	74.23
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	75.06	74.02
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	74.83	73.96
CDX94504	Canola	cytosol, endoplasmic reticulum, peroxisome	74.83	73.79
CDY04398	Canola	cytosol, endoplasmic reticulum, golgi	73.66	73.66
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	73.89	72.87
Solyc08g079440.1.1	Tomato	nucleus	75.06	72.36
KRH76209	Soybean	endoplasmic reticulum, plastid	72.96	71.46
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	72.96	71.46
PGSC0003DMT400010106	Potato	cytosol, endoplasmic reticulum, golgi, plastid	74.13	71.3
KRH40009	Soybean	plastid	66.2	69.78
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	67.13	66.98
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	70.86	66.23
KRH58854	Soybean	endoplasmic reticulum, golgi	63.64	65.62
KRH02967	Soybean	nucleus	65.5	65.2
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	65.5	65.2
KRG97348	Soybean	endoplasmic reticulum	64.1	62.64
KRH31569	Soybean	mitochondrion	66.2	61.47
TraesCS4A01G080300.1	Wheat	plastid	65.73	59.0
Zm00001d028427_P001	Maize	plastid	65.73	58.87
Zm00001d047915_P001	Maize	plastid	65.5	58.66
EER95171	Sorghum	plastid	65.5	58.54
TraesCS4D01G224000.1	Wheat	plastid	65.73	58.51
Os03t0249500-01	Rice	plastid	65.97	58.47
TraesCS4B01G223700.1	Wheat	plastid	65.97	57.64
KRH42756	Soybean	extracellular, golgi, plastid	63.4	55.17
HORVU4Hr1G063010.1	Barley	peroxisome	65.97	55.06
KRH51264	Soybean	plastid	23.08	28.21
KRH59827	Soybean	extracellular, golgi	21.68	26.57
KRH60045	Soybean	extracellular	21.21	26.0
KRH41129	Soybean	nucleus	20.98	25.71
KRH41316	Soybean	extracellular, golgi	20.98	25.71
KRG99450	Soybean	cytosol, mitochondrion, nucleus	3.96	24.64
KRH00406	Soybean	cytosol, mitochondrion, nucleus	3.96	24.64
KRH36892	Soybean	golgi, mitochondrion	22.38	23.13
KRH11871	Soybean	golgi, plastid	22.38	23.13
KRH77652	Soybean	plastid	20.98	23.02
KRH27832	Soybean	plastid	20.28	22.42
KRH43065	Soybean	golgi, mitochondrion, plastid	21.68	22.36
KRH59194	Soybean	golgi, mitochondrion	21.21	21.88
KRH26241	Soybean	cytosol	2.56	20.75
KRH13001	Soybean	cytosol, mitochondrion, plastid	22.38	14.37
KRH43408	Soybean	nucleus	22.38	14.37
KRH21867	Soybean	cytosol, mitochondrion, plastid	22.14	14.2
KRH27429	Soybean	cytosol, mitochondrion, plastid	22.14	14.2
KRH46062	Soybean	cytosol	19.81	13.89
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	20.98	13.64
KRH04933	Soybean	cytosol, mitochondrion, plastid	20.28	13.51
KRH16155	Soybean	cytosol	20.28	13.28
KRH57264	Soybean	endoplasmic reticulum	2.56	5.26
KRH03995	Soybean	plastid	3.5	4.97
KRH77471	Soybean	cytosol, endoplasmic reticulum	3.03	4.68
KRH57441	Soybean	cytosol	3.26	4.5

Protein Annotations

EntrezGene:100778002	MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EMBL:ACUP02002824	InterPro:Epimerase_deHydtase
EnsemblPlantsGene:GLYMA_05G052100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662
UniProt:I1K0H0	EnsemblPlants:KRH57292	ProteinID:KRH57292	ProteinID:KRH57292.1	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim
PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF20	SUPFAM:SSF51735	TMHMM:TMhelix
UniParc:UPI0002339588	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:4682033..4683748

Molecular Weight (calculated)

47477.0 Da

IEP (calculated)

10.528

GRAVY (calculated)

-0.249

Length

429 amino acids

Sequence
(BLAST)

001: MSQVNEHHHA PSTPGKLKPE KSPYNHRLRI HSSLSKLTLW SSFFLAFILF LFILSPPSPS ASPRRSLGDS WGGPHWEKRV AKSARRSSPS SLSVLVTGAA
101: GFVGSHVSLS LKRRGDGVLG IDNFNRYYDP ALKRARQRLL DRAGVFVVDA DLNDAALLRK LFDVVPFTHV MHLAAQAGVR YAMQNPQSYI HSNIAAFINL
201: LEASKSANPQ PSIVWASSSS VYGLNSKVPF SEKDRTDQPA SLYAATKKAG EEIAHSYNHI YGLSITGLRF FTVYGPWGRP DMAYFFFTKD ILKGKQIAIF
301: ESPDGGTVAR DFTYIDDIVK GCLGALDTAK KSTGSGGKKK GPAQFRVFNL GNTSPVPVTE LVAILEKLLK VKAKKKVLPM PTNGDVKFTH ANISLAHRDL
401: GYRPTTDLET GLRKFVKWYL EFYSKKTSW

Best Arabidopsis Sequence Match ( AT4G00110.1 )
(BLAST)

001: MKQMSHLDDI PSTPGKFKPY FHRTRWQSSV AKLAFWSLVF VGLIFIFFYR SPVSSNPADP SRRSLRTYSW GGPAWEKRVR SSARLRTRRG FSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS

Arabidopsis Description

GAE3GAE3 [Source:UniProtKB/TrEMBL;Acc:A0A178V2K1]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.