CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	92.48	85.76
KRH21867	Soybean	cytosol, mitochondrion, plastid	74.67	68.31
KRH27429	Soybean	cytosol, mitochondrion, plastid	74.51	68.16
VIT_19s0014g00290.t01	Wine grape	cytosol, mitochondrion, plastid	75.16	68.15
KRH13001	Soybean	cytosol, mitochondrion, plastid	74.02	67.81
TraesCS5B01G023700.1	Wheat	cytosol, mitochondrion, plastid	73.53	67.47
TraesCS5D01G032700.1	Wheat	cytosol, mitochondrion, plastid	73.37	67.32
KRH43408	Soybean	nucleus	72.88	66.77
Solyc07g062130.2.1	Tomato	extracellular, unclear	73.04	66.32
PGSC0003DMT400018192	Potato	cytosol, mitochondrion, plastid	72.55	65.88
Zm00001d037784_P002	Maize	endoplasmic reticulum	72.39	63.65
KXG21627	Sorghum	mitochondrion	70.42	62.83
HORVU5Hr1G007050.2	Barley	plastid	73.37	61.93
KRH04933	Soybean	cytosol, mitochondrion, plastid	64.71	61.49
KRH16155	Soybean	cytosol	65.03	60.76
GSMUA_Achr4P02550_001	Banana	mitochondrion	44.77	60.09
CDX81794	Canola	plastid	30.56	53.89
KRH03995	Soybean	plastid	25.65	51.99
KRH77471	Soybean	cytosol, endoplasmic reticulum	22.39	49.28
KRH57264	Soybean	endoplasmic reticulum	16.34	47.85
KRH57441	Soybean	cytosol	23.86	46.95
KRH41316	Soybean	extracellular, golgi	13.56	23.71
KRH51264	Soybean	plastid	13.4	23.36
KRH60045	Soybean	extracellular	13.24	23.14
KRH77652	Soybean	plastid	13.4	20.97
KRH27832	Soybean	plastid	13.24	20.88
KRH41129	Soybean	nucleus	11.93	20.86
KRH59827	Soybean	extracellular, golgi	11.93	20.86
KRH76209	Soybean	endoplasmic reticulum, plastid	14.71	20.55
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	14.71	20.55
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	14.22	20.23
KRH43065	Soybean	golgi, mitochondrion, plastid	13.56	19.95
KRH59194	Soybean	golgi, mitochondrion	13.56	19.95
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	13.89	19.81
KRH36892	Soybean	golgi, mitochondrion	13.4	19.76
KRH11871	Soybean	golgi, plastid	13.4	19.76
KRH58854	Soybean	endoplasmic reticulum, golgi	13.4	19.71
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	13.56	19.26
KRH02967	Soybean	nucleus	13.56	19.26
KRH40009	Soybean	plastid	12.75	19.16
KRG97348	Soybean	endoplasmic reticulum	13.07	18.22
KRH31569	Soybean	mitochondrion	13.24	17.53
KRH00406	Soybean	cytosol, mitochondrion, nucleus	1.96	17.39
KRG99450	Soybean	cytosol, mitochondrion, nucleus	1.96	17.39
KRH26241	Soybean	cytosol	1.47	16.98
KRH42756	Soybean	extracellular, golgi, plastid	13.4	16.63

Protein Annotations

EMBL:ACUP02005314	EnsemblPlants:KRH46062	EnsemblPlantsGene:GLYMA_08G309800	Gene3D:3.40.50.720	Gene3D:3.90.25.10	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43000	PANTHER:PTHR43000:SF8	PFAM:PF16363	ProteinID:KRH46062	ProteinID:KRH46062.1
SUPFAM:SSF51735	UniParc:UPI000296E329	UniProt:I1KY24	MapMan:3.13.6.1	:	:

Description

hypothetical protein

Coordinates

chr8:+:42902968..42905220

Molecular Weight (calculated)

69085.6 Da

IEP (calculated)

7.021

GRAVY (calculated)

-0.277

Length

612 amino acids

Sequence
(BLAST)

001: MANTYKPKNI LITGAAGFIA SHVCNRIVQN YPDYKIIVLD KLDYCSNLKN LIHLCSSPNF KFIKGDIGSA DLVNYILLTE SIDTIMHFAA QTHVDNSFGN
101: SFEFTKNNIY GTHVLLEACK VSKGQVKRFI HVSTDEVYGE TDEDAVVGNH ELLPTNPYSA TKAGAEMLVM AYGRSYGLPV ITTRGNNVYG PNQFPEKLIP
201: KFLILAMKGR SLPIHGDGSN VRSYLYCEDV AEAFEIILHR GEVGHVYNIG TKKERRVIDV ARDICRLFNL DPDKHVKYFL DDEKLKNLGW CEGTTWEEGL
301: RKTMDWYVKN PDWWGDVSGA LLPHPRMLTM PGVEKYCYDD IDNVTQIASD GDVNHSNQNR MVVVSATRNN VSPHKASLKF LIYGGAGNIK PTHVFNASGV
401: TGALNVKWFE DHIPESIRAV VVGVLTLADV CRDHGLPMMN YAFCGNFEDK TNSTDSFYFR TQAKVEGLLK EYENVCTLRI QLPVSSDLSN PHNFIIKITR
501: SDKMANIPNR ITVLDELVPI SVEMAKRNCR GIWNFTNPGI VTCNEILEMY KDYVNPTFRW VNFTPEQQAH FTSPSTNEMD SSKLKKEFSE LLPIKDSLIK
601: YVFEPKKKSS GF

Best Arabidopsis Sequence Match ( AT1G53500.1 )
(BLAST)

001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT

Arabidopsis Description

RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.