CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21867	Soybean	cytosol, mitochondrion, plastid	98.36	98.36
KRH13001	Soybean	cytosol, mitochondrion, plastid	92.38	92.52
KRH43408	Soybean	nucleus	92.08	92.22
VIT_19s0014g00290.t01	Wine grape	cytosol, mitochondrion, plastid	90.73	89.93
Solyc07g062130.2.1	Tomato	extracellular, unclear	86.85	86.2
PGSC0003DMT400018192	Potato	cytosol, mitochondrion, plastid	86.1	85.46
TraesCS5D01G032700.1	Wheat	cytosol, mitochondrion, plastid	84.9	85.16
TraesCS5B01G023700.1	Wheat	cytosol, mitochondrion, plastid	84.75	85.01
GSMUA_Achr4P02550_001	Banana	mitochondrion	57.55	84.43
KRH57441	Soybean	cytosol	38.71	83.28
KXG21627	Sorghum	mitochondrion	82.21	80.17
Zm00001d037784_P002	Maize	endoplasmic reticulum	83.26	80.03
KRH03995	Soybean	plastid	35.58	78.81
HORVU5Hr1G007050.2	Barley	plastid	84.9	78.34
KRH16155	Soybean	cytosol	76.38	78.02
KRH57264	Soybean	endoplasmic reticulum	24.22	77.51
KRH04933	Soybean	cytosol, mitochondrion, plastid	74.59	77.48
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	75.49	76.52
KRH77471	Soybean	cytosol, endoplasmic reticulum	31.69	76.26
KRH46062	Soybean	cytosol	68.16	74.51
CDX81794	Canola	plastid	35.73	68.88
KRH41316	Soybean	extracellular, golgi	12.71	24.29
KRH51264	Soybean	plastid	12.71	24.22
KRH60045	Soybean	extracellular	12.56	24.0
KRH26241	Soybean	cytosol	1.79	22.64
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	14.35	22.33
KRH59827	Soybean	extracellular, golgi	11.66	22.29
KRH41129	Soybean	nucleus	11.66	22.29
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	14.2	22.14
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	14.2	22.04
KRH02967	Soybean	nucleus	14.2	22.04
KRH27832	Soybean	plastid	12.71	21.91
KRH58854	Soybean	endoplasmic reticulum, golgi	13.6	21.88
KRH77652	Soybean	plastid	12.71	21.74
KRH00406	Soybean	cytosol, mitochondrion, nucleus	2.24	21.74
KRG99450	Soybean	cytosol, mitochondrion, nucleus	2.24	21.74
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	14.05	21.46
KRH76209	Soybean	endoplasmic reticulum, plastid	13.75	21.0
KRH11871	Soybean	golgi, plastid	13.0	20.96
KRH40009	Soybean	plastid	12.71	20.88
KRH36892	Soybean	golgi, mitochondrion	12.86	20.72
KRH43065	Soybean	golgi, mitochondrion, plastid	12.71	20.43
KRG97348	Soybean	endoplasmic reticulum	13.15	20.05
KRH59194	Soybean	golgi, mitochondrion	12.41	19.95
KRH31569	Soybean	mitochondrion	13.3	19.26
KRH42756	Soybean	extracellular, golgi, plastid	13.3	18.05

Protein Annotations

KEGG:00521+4.2.1.46	KEGG:00523+4.2.1.46	KEGG:00525+4.2.1.46	EntrezGene:100775641	MapMan:3.13.6.1	Gene3D:3.40.50.720
Gene3D:3.90.25.10	EMBL:ACUP02007805	EnsemblPlantsGene:GLYMA_12G234300	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008460	GO:GO:0009225	GO:GO:0009987	UniProt:I1LVA7
ProteinID:KRH27428.1	EnsemblPlants:KRH27429	ProteinID:KRH27429	ProteinID:KRH27429.1	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PFAM:PF04321	PFAM:PF16363	PANTHER:PTHR43000	PANTHER:PTHR43000:SF8	MetaCyc:PWY-3221	MetaCyc:PWY-6808
MetaCyc:PWY-6942	MetaCyc:PWY-6953	MetaCyc:PWY-6973	MetaCyc:PWY-6974	MetaCyc:PWY-6976	MetaCyc:PWY-7104
MetaCyc:PWY-7301	MetaCyc:PWY-7312	MetaCyc:PWY-7315	MetaCyc:PWY-7316	MetaCyc:PWY-7318	MetaCyc:PWY-7413
MetaCyc:PWY-7414	MetaCyc:PWY-7440	MetaCyc:PWY-7657	MetaCyc:PWY-7688	MetaCyc:PWY-7814	InterPro:RmlD-like-bd
SUPFAM:SSF51735	TIGRFAMs:TIGR01181	UniParc:UPI000233CD38	InterPro:dTDP_Gluc_deHydtase	:	:

Description

hypothetical protein

Coordinates

chr12:-:39378718..39382347

Molecular Weight (calculated)

75621.5 Da

IEP (calculated)

7.115

GRAVY (calculated)

-0.379

Length

669 amino acids

Sequence
(BLAST)

001: MATHTPKNIL ITGAAGFIAS HVANRLIRNY PQYKIVVLDK LDYCSNLKNL IPSKSSPNFK FVKGDIGSAD LVNYLLITES IDTIMHFAAQ THVDNSFGNS
101: FEFTKNNIYG THVLLEACKV TGQIKRFIHV STDEVYGETD EDAVVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP VITTRGNNVY GPNQFPEKLI
201: PKFILLAMQG KPLPIHGDGS NVRSYLYCED VAEAFEVILH KGEVGHVYNI GTKKERRVID VAKDICRLFK MDPETSIKFV ENRPFNDQRY FLDDEKLKIL
301: GWSERTTWEE GLKKTMDWYI NNPDWWGDVS GALLPHPRML MMPGGLERHF DGSDEEKPPS YVSTNTRMVV PTSKNVNSSQ KPALKFLLYG RTGWIGGLLG
401: KLCEKQEIPY EYGKGRLEDR SSLVADIQNV KPTHIFNAAG VTGRPNVDWC ESHKTETIRT NVAGTLTLAD VSREHGILMI NYATGCIFEY DKAHPEGSGI
501: GFKEEDKPNF IGSFYSKTKA MVEELLKEYD NVCTLRVRMP ISSDLSNPRN FITKISRYNK VVNIPNSMTI LDELLPISIE MAKRNLRGIW NFTNPGAVSH
601: NEILEMYRDY IDPSFKWTNF NLEEQAKVII APRSNNEMDA SKLKNEFPEL LSIKESLIKY VFEPNKKTA

Best Arabidopsis Sequence Match ( AT1G53500.1 )
(BLAST)

001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT

Arabidopsis Description

RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.