CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00406	Soybean	cytosol, mitochondrion, nucleus	19.66	100.0
KRH26241	Soybean	cytosol	15.1	100.0
KRG99450	Soybean	cytosol, mitochondrion, nucleus	19.37	98.55
KRH59827	Soybean	extracellular, golgi	78.35	78.57
KRH41129	Soybean	nucleus	76.92	77.14
GSMUA_Achr1P18740_001	Banana	cytosol	76.92	76.27
GSMUA_Achr5P13620_001	Banana	cytosol	75.78	75.78
Zm00001d021249_P003	Maize	cytosol	70.37	68.04
KXG36042	Sorghum	cytosol	70.09	67.58
KRH60045	Soybean	extracellular	67.24	67.43
KRH41316	Soybean	extracellular, golgi	66.67	66.86
TraesCS5B01G315700.1	Wheat	cytosol	68.38	65.22
TraesCS5D01G321100.1	Wheat	cytosol	68.38	65.04
TraesCS5A01G314800.1	Wheat	cytosol	68.09	64.95
Os09t0526700-01	Rice	cytosol	66.38	62.47
KRH27832	Soybean	plastid	68.09	61.6
KRH77652	Soybean	plastid	68.09	61.13
HORVU5Hr1G080860.10	Barley	mitochondrion	68.09	56.37
KRH43065	Soybean	golgi, mitochondrion, plastid	41.31	34.86
KRH36892	Soybean	golgi, mitochondrion	40.74	34.46
KRH11871	Soybean	golgi, plastid	40.46	34.22
KRH59194	Soybean	golgi, mitochondrion	40.17	33.89
KRH40009	Soybean	plastid	27.07	23.34
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	28.21	23.08
KRH58854	Soybean	endoplasmic reticulum, golgi	27.07	22.84
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	27.92	22.79
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	27.35	22.27
KRH02967	Soybean	nucleus	27.07	22.04
KRH31569	Soybean	mitochondrion	26.78	20.35
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	25.36	20.32
KRH76209	Soybean	endoplasmic reticulum, plastid	25.36	20.32
KRG97348	Soybean	endoplasmic reticulum	24.79	19.82
KRH42756	Soybean	extracellular, golgi, plastid	27.64	19.68
KRH46062	Soybean	cytosol	23.36	13.4
KRH04933	Soybean	cytosol, mitochondrion, plastid	24.22	13.2
KRH16155	Soybean	cytosol	24.22	12.98
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	24.22	12.88
KRH27429	Soybean	cytosol, mitochondrion, plastid	24.22	12.71
KRH21867	Soybean	cytosol, mitochondrion, plastid	24.22	12.71
KRH43408	Soybean	nucleus	23.93	12.57
KRH13001	Soybean	cytosol, mitochondrion, plastid	23.93	12.57
KRH03995	Soybean	plastid	4.27	4.97
KRH57264	Soybean	endoplasmic reticulum	2.85	4.78
KRH77471	Soybean	cytosol, endoplasmic reticulum	3.7	4.68
KRH57441	Soybean	cytosol	3.13	3.54

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	EntrezGene:100805114	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10
EMBL:ACUP02004733	EMBL:BT097267	UniProt:C6THZ0	EnsemblPlantsGene:GLYMA_07G271200	GO:GO:0003674	GO:GO:0003824
GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0016853	GO:GO:0016857	GO:GO:0018024
GO:GO:0019538	GO:GO:0034968	EnsemblPlants:KRH51264	ProteinID:KRH51264	ProteinID:KRH51264.1	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF16363	PRINTS:PR01713	PANTHER:PTHR43725	PANTHER:PTHR43725:SF9
MetaCyc:PWY-3821	MetaCyc:PWY-6317	MetaCyc:PWY-6397	MetaCyc:PWY-6527	MetaCyc:PWY-7328	MetaCyc:PWY-7344
SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0001B16908	:	:

Description

hypothetical protein

Coordinates

chr7:+:44377404..44379356

Molecular Weight (calculated)

39163.2 Da

IEP (calculated)

8.844

GRAVY (calculated)

-0.272

Length

351 amino acids

Sequence
(BLAST)

001: MVSPMSTVLV TGGAGFIGSH TVLQLLKQGF RVSIIDNLDN SLIEAVHRVR RLVGPHLSNN LTFFHGDLRN VQDLEAVFSK SKFDAVIHFA GLKGVGESVA
101: KPRRYYDNNL VGTINLFEAM AKYKCKKMVI SSSATVYGEA DRVPCVEEEV HLQAMNPYGR TKLFVEEIAR DIQRAETEWR IILLRYFNPV GAHESGQIGE
201: DPRGIPNNLM PYIHQVAVGR LPQLNVYGHD YPTKDGTPIR DYIHVMDLAD GHIAALRKLF ATDHIGCSAY NLGTGRGTSV LEMVAAFEKA SGKKIPLKMC
301: PRRPGDATAV YASTDKAEKE LGWKAKYGIE EMCRDLWNWT SKNPWGYQGK H

Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L

Arabidopsis Description

UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.