Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G78570.1 | KRH77471 | AT1G63000.1 | 21798944 |
| AT1G78570.1 | KRH04933 | AT1G78570.1 | 21798944 |
| AT1G78570.1 | KRH16155 | AT1G78570.1 | 21798944 |
| AT1G78570.1 | KRH00551 | AT3G54220.1 | 19228333 |
| AT1G78570.1 | KRH40615 | AT3G54220.1 | 19228333 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16155 | Soybean | cytosol | 95.34 | 93.74 |
| VIT_04s0069g00830.t01 | Wine grape | cytosol, mitochondrion, plastid | 79.66 | 78.08 |
| KRH03995 | Soybean | plastid | 35.87 | 76.49 |
| PGSC0003DMT400075973 | Potato | cytosol, mitochondrion, peroxisome | 77.48 | 76.3 |
| Solyc08g069110.2.1 | Tomato | unclear | 77.02 | 76.19 |
| KRH27429 | Soybean | cytosol, mitochondrion, plastid | 77.48 | 74.59 |
| KRH13001 | Soybean | cytosol, mitochondrion, plastid | 76.86 | 74.1 |
| Bra035048.1-P | Field mustard | cytosol, mitochondrion, plastid | 77.02 | 74.03 |
| AT1G78570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 76.86 | 73.99 |
| KRH21867 | Soybean | cytosol, mitochondrion, plastid | 76.86 | 73.99 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 74.07 | 73.84 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 74.07 | 73.84 |
| KRH43408 | Soybean | nucleus | 76.55 | 73.8 |
| KRH77471 | Soybean | cytosol, endoplasmic reticulum | 31.83 | 73.74 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 76.71 | 73.73 |
| Bra027310.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 76.09 | 73.68 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 76.4 | 73.43 |
| Bra026009.1-P | Field mustard | cytosol, mitochondrion, plastid | 76.24 | 73.07 |
| AT3G14790.2 | Thale cress | mitochondrion | 75.62 | 73.01 |
| KRH57264 | Soybean | endoplasmic reticulum | 23.6 | 72.73 |
| AT1G53500.1 | Thale cress | cytosol, extracellular, peroxisome | 75.16 | 72.56 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 74.84 | 72.48 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 72.36 | 72.36 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 74.69 | 72.33 |
| Bra021578.1-P | Field mustard | cytosol, mitochondrion, plastid | 72.2 | 72.2 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 72.05 | 72.16 |
| Bra039675.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 74.38 | 72.03 |
| Zm00001d047796_P003 | Maize | extracellular, nucleus, plasma membrane | 75.16 | 72.02 |
| EER95078 | Sorghum | cytosol, mitochondrion, peroxisome | 75.16 | 72.02 |
| EER95086 | Sorghum | cytosol, mitochondrion, plastid | 75.0 | 71.88 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 74.38 | 71.71 |
| Bra038127.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 74.38 | 71.71 |
| TraesCS4A01G099200.1 | Wheat | cytosol | 75.16 | 71.7 |
| Zm00001d028654_P002 | Maize | cytosol | 74.69 | 71.58 |
| Os03t0278200-01 | Rice | nucleus, plasma membrane | 74.84 | 71.41 |
| TraesCS4D01G206000.1 | Wheat | mitochondrion | 75.31 | 71.11 |
| TraesCS4B01G205100.3 | Wheat | mitochondrion | 75.0 | 70.82 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 77.48 | 70.58 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 44.72 | 67.29 |
| HORVU4Hr1G059120.2 | Barley | plastid | 75.0 | 66.81 |
| KRH57441 | Soybean | cytosol | 31.99 | 66.24 |
| GSMUA_Achr3P31820_001 | Banana | cytosol, mitochondrion, plastid | 61.34 | 65.29 |
| KRH46062 | Soybean | cytosol | 61.49 | 64.71 |
| KRG98907 | Soybean | cytosol, mitochondrion, peroxisome | 65.37 | 63.79 |
| KRH41316 | Soybean | extracellular, golgi | 13.66 | 25.14 |
| KRH60045 | Soybean | extracellular | 13.35 | 24.57 |
| KRH51264 | Soybean | plastid | 13.2 | 24.22 |
| KRG99450 | Soybean | cytosol, mitochondrion, nucleus | 2.48 | 23.19 |
| KRH00406 | Soybean | cytosol, mitochondrion, nucleus | 2.48 | 23.19 |
| KRH41129 | Soybean | nucleus | 12.58 | 23.14 |
| KRH59827 | Soybean | extracellular, golgi | 12.58 | 23.14 |
| KRH27832 | Soybean | plastid | 13.35 | 22.16 |
| KRH77652 | Soybean | plastid | 13.35 | 21.99 |
| KRH11871 | Soybean | golgi, plastid | 13.51 | 20.96 |
| KRH26241 | Soybean | cytosol | 1.71 | 20.75 |
| KRH36892 | Soybean | golgi, mitochondrion | 13.35 | 20.72 |
| KRH59194 | Soybean | golgi, mitochondrion | 13.35 | 20.67 |
| KRH43065 | Soybean | golgi, mitochondrion, plastid | 13.35 | 20.67 |
| KRH04016 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 13.66 | 20.47 |
| KRH57292 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 13.51 | 20.28 |
| KRH02967 | Soybean | nucleus | 13.04 | 19.49 |
| KRH72376 | Soybean | endoplasmic reticulum, mitochondrion | 13.04 | 19.49 |
| KRH76209 | Soybean | endoplasmic reticulum, plastid | 13.2 | 19.41 |
| KRH65316 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 13.2 | 19.41 |
| KRH58854 | Soybean | endoplasmic reticulum, golgi | 12.42 | 19.23 |
| KRH40009 | Soybean | plastid | 12.11 | 19.16 |
| KRG97348 | Soybean | endoplasmic reticulum | 12.42 | 18.22 |
| KRH31569 | Soybean | mitochondrion | 12.58 | 17.53 |
| KRH42756 | Soybean | extracellular, golgi, plastid | 12.42 | 16.23 |
Protein Annotations
| EMBL:ACUP02010640 | EnsemblPlants:KRH04933 | EnsemblPlantsGene:GLYMA_17G196900 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | InterPro:NAD(P)-bd_dom |
| InterPro:NAD(P)-bd_dom_sf | InterPro:RmlD-like-bd | PANTHER:PTHR43000 | PANTHER:PTHR43000:SF8 | PFAM:PF04321 | PFAM:PF16363 |
| ProteinID:KRH04933 | ProteinID:KRH04933.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0006ED7290 | UniProt:A0A0R0FQT4 |
| MapMan:3.13.6.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:30929726..30932725
Molecular Weight (calculated)
73614.2 Da
IEP (calculated)
7.071
GRAVY (calculated)
-0.370
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MYEPKNILIT GAAGFIASHV TTRLIDRYPS YKIVALDKLD YCSTFKNLLS CSSSSKFKFI KGDIATADIV NHILIEEEID TIMHFAAQTH VDNSFGNSME
101: FTYNNIYGTH VLLEACRVTN CVKRFIHVST DEVYGETDLD ADIGNHEASQ LLPTNPYSAT KAGAEMLVMA YHRSYDLPII TSRGNNVYGP NQYPEKLVPK
201: FILLAMKGEK LPIHGDGSNV RSYLHCGDVA EAFEVILHKG EIGQVYNIGT KKERSVLDVA EEICKLFKLN PKDVIEYFLD DQKLKKLGWQ ERTPWEEGLK
301: MTIEWYKKNP DWWGDVSTAL NPHPRFSAIN LSDEAQWSFQ YGYSRLARSY TEVGRKKSRL KFLIYGRTGW IGGLLGKLCD EERIDWEYGR GRLEDRKSLM
401: EDIRRVMPTH VLSAAGVTGR PNVDWCESHK AETIRTNVVG ILTLADVCRE YSLYMMNFAT GCIFEYDKEH PLGSGIGFKE EDKPNFIGSF YSKTKAMVED
501: LLKNYDNVCT LRVRMPISSD LSNPRNFITK ISRYNKVVNI PNSMTVLDEL LPISIEMAKR NLKGIWNFTN PGVISHNQIL ELYRDNIDPQ FKWENFDLKE
601: QAKVIVAPRS NNEMDASKLK NEFPNLLSIK DSIIKFVFEP NKKT
101: FTYNNIYGTH VLLEACRVTN CVKRFIHVST DEVYGETDLD ADIGNHEASQ LLPTNPYSAT KAGAEMLVMA YHRSYDLPII TSRGNNVYGP NQYPEKLVPK
201: FILLAMKGEK LPIHGDGSNV RSYLHCGDVA EAFEVILHKG EIGQVYNIGT KKERSVLDVA EEICKLFKLN PKDVIEYFLD DQKLKKLGWQ ERTPWEEGLK
301: MTIEWYKKNP DWWGDVSTAL NPHPRFSAIN LSDEAQWSFQ YGYSRLARSY TEVGRKKSRL KFLIYGRTGW IGGLLGKLCD EERIDWEYGR GRLEDRKSLM
401: EDIRRVMPTH VLSAAGVTGR PNVDWCESHK AETIRTNVVG ILTLADVCRE YSLYMMNFAT GCIFEYDKEH PLGSGIGFKE EDKPNFIGSF YSKTKAMVED
501: LLKNYDNVCT LRVRMPISSD LSNPRNFITK ISRYNKVVNI PNSMTVLDEL LPISIEMAKR NLKGIWNFTN PGVISHNQIL ELYRDNIDPQ FKWENFDLKE
601: QAKVIVAPRS NNEMDASKLK NEFPNLLSIK DSIIKFVFEP NKKT
001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT
Arabidopsis Description
RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [extracellular,cytosol,peroxisome]
SUBAcon: [extracellular,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.