CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	99.25	99.25
CDY45116	Canola	cytosol, mitochondrion, peroxisome	99.25	99.25
CDY60210	Canola	cytosol, mitochondrion, peroxisome	96.99	96.56
CDY25850	Canola	cytosol, mitochondrion, peroxisome	61.5	95.56
AT1G53500.1	Thale cress	cytosol, extracellular, peroxisome	94.59	94.3
CDX98494	Canola	cytosol, mitochondrion, plastid	88.42	91.02
CDX97601	Canola	cytosol, mitochondrion, plastid	88.27	90.87
CDY32340	Canola	cytosol, mitochondrion, peroxisome	87.52	90.51
CDY20084	Canola	cytosol, mitochondrion, peroxisome	87.52	90.37
GSMUA_Achr4P10430_001	Banana	cytosol, extracellular, mitochondrion	83.61	85.67
CDY40003	Canola	cytosol, mitochondrion, plastid	85.11	84.48
CDY35137	Canola	cytosol, mitochondrion, plastid	85.11	84.48
CDY71423	Canola	cytosol, nucleus	53.98	83.29
GSMUA_Achr3P31810_001	Banana	cytosol, mitochondrion, peroxisome	76.69	82.13
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	82.71	81.85
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	78.2	81.76
Os03t0278200-01	Rice	nucleus, plasma membrane	82.86	81.63
TraesCS4A01G099200.1	Wheat	cytosol	82.71	81.48
CDX88455	Canola	cytosol, peroxisome, plastid	86.62	81.47
EER95086	Sorghum	cytosol, mitochondrion, plastid	82.26	81.4
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	81.8	80.95
TraesCS4D01G206000.1	Wheat	mitochondrion	82.71	80.65
TraesCS4B01G205100.3	Wheat	mitochondrion	82.56	80.5
Zm00001d028654_P002	Maize	cytosol	81.05	80.21
CDY45969	Canola	cytosol	35.19	78.79
CDY45471	Canola	cytosol	34.89	78.11
VIT_04s0069g00830.t01	Wine grape	cytosol, mitochondrion, plastid	76.99	77.93
PGSC0003DMT400075973	Potato	cytosol, mitochondrion, peroxisome	75.49	76.76
Solyc08g069110.2.1	Tomato	unclear	74.74	76.34
HORVU4Hr1G059120.2	Barley	plastid	82.56	75.93
KRH16155	Soybean	cytosol	73.83	74.96
KRH04933	Soybean	cytosol, mitochondrion, plastid	72.48	74.84
GSMUA_Achr3P31820_001	Banana	cytosol, mitochondrion, plastid	67.97	74.71
CDY57072	Canola	cytosol, extracellular, peroxisome	35.34	72.76
CDX98052	Canola	cytosol	35.19	72.45
CDX81794	Canola	plastid	34.74	66.57
CDY72469	Canola	cytosol	12.18	61.36
CDY47846	Canola	golgi	13.23	25.66
CDY08378	Canola	golgi	13.08	25.22
CDY71965	Canola	cytosol, mitochondrion	9.02	25.21
CDY31278	Canola	cytosol	12.93	24.5
CDY21065	Canola	cytosol	12.93	24.5
CDY50431	Canola	cytosol	12.78	24.43
CDY03506	Canola	cytosol, golgi	12.63	24.14
CDY47611	Canola	golgi	12.63	24.14
CDY69000	Canola	cytosol	12.03	23.88
CDY49193	Canola	cytosol	12.48	23.65
CDY47346	Canola	cytosol	12.48	23.65
CDX86828	Canola	golgi	12.33	23.63
CDY40862	Canola	cytosol, golgi	12.33	23.63
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	14.14	21.66
CDX78998	Canola	mitochondrion	13.38	21.65
CDX94504	Canola	cytosol, endoplasmic reticulum, peroxisome	14.14	21.61
CDY04398	Canola	cytosol, endoplasmic reticulum, golgi	13.83	21.45
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	13.83	21.45
CDX82768	Canola	mitochondrion	13.23	21.41
CDY63064	Canola	cytosol, endoplasmic reticulum, golgi, plastid	13.68	21.16
CDY67756	Canola	cytosol, endoplasmic reticulum, golgi, plastid	13.83	21.15
CDY02312	Canola	mitochondrion	13.23	20.95
CDY09555	Canola	mitochondrion	13.23	20.95
CDX95646	Canola	cytosol, endoplasmic reticulum, golgi, plastid	13.68	20.92
CDY13102	Canola	golgi	12.78	20.63
CDY29113	Canola	golgi	12.78	20.63
CDY49498	Canola	golgi	12.78	20.63
CDY49015	Canola	golgi	12.78	20.63
CDX77481	Canola	endoplasmic reticulum	13.98	20.53
CDY31644	Canola	golgi	13.08	20.52
CDY52524	Canola	golgi	13.08	20.52
CDX85133	Canola	endoplasmic reticulum	13.98	20.39
CDX92990	Canola	endoplasmic reticulum	13.98	20.39
CDY28188	Canola	cytosol, endoplasmic reticulum, golgi, plastid	13.08	20.28
CDY70926	Canola	cytosol, endoplasmic reticulum, golgi, plastid	13.08	20.28
CDX72242	Canola	cytosol, endoplasmic reticulum, golgi, plastid	13.08	20.23
CDY39205	Canola	cytosol, endoplasmic reticulum, golgi, plastid	13.08	20.23
CDY53207	Canola	endoplasmic reticulum	13.83	20.22
CDY18087	Canola	cytosol, endoplasmic reticulum, golgi	13.83	20.0
CDY64583	Canola	endoplasmic reticulum	13.83	20.0
CDY60264	Canola	plastid	13.08	14.24
CDY49495	Canola	cytosol	1.95	13.27

Protein Annotations

EnsemblPlants:CDY24092	EnsemblPlantsGene:GSBRNA2T00024639001	Gene3D:3.40.50.720	Gene3D:3.90.25.10	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
InterPro:RmlD-like-bd	PANTHER:PTHR43000	PANTHER:PTHR43000:SF8	PFAM:PF04321	PFAM:PF16363	ProteinID:CDY24092
ProteinID:CDY24092.1	SUPFAM:SSF51735	UniParc:UPI0004EE57E4	UniProt:A0A078GG23	MapMan:3.13.6.1	:

Description

BnaA06g00900DBnaA06g00900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GG23]

Coordinates

chrLK032153:+:433779..436445

Molecular Weight (calculated)

74948.7 Da

IEP (calculated)

6.791

GRAVY (calculated)

-0.380

Length

665 amino acids

Sequence
(BLAST)

001: MATEYKPKNI LITGAAGFIA SHVANRLIRS YPDYKIVVLD KLDYCSDLKN LDPSFSSPNF RFVKGDIASD DLVNYLLITE NIDTIMHFAA QTHVDNSFGN
101: SFEFTKNNIY GTHVLLEACK VTGQIKRFIH VSTDEVYGET DEDAAVGNHE ASQLLPTNPY SATKAGAEML VMAYGRSYGL PVITTRGNNV YGPNQFPEKM
201: IPKFMLLAMS GKPLPIHGDG SNVRSYLYCE DVAEAFEVVL HKGEVGHVYN IGTKRERRVI DVARDICKLL GKDPEASIQF VENRPFNDQR YFLDDQKLKN
301: LGWCERTGWE DGLKKTMEWY TQNPEWWGDV SGALLPHPRM LMMPGGRVSD EKKDTSSNTV QTFTVVTPNN KAHDPKDKAS LKFLIYGKTG WIGGLLGKLC
401: EKQGITYEYG KGRLEDRASL MADIRSIKPT HVFNAAGLTG RPNVDWCESH KPETIRVNVA GTLTLADVCR ENGLLMMNFA TGCIFEYDAA HPEGSGIGFK
501: EEDKPNFTGS FYSKTKAMVE ELLREFDNVC TLRVRMPISS DLNNPRNFIT KISRYNKVVN IPNSMTILDE LLPISIEMAK RNLRGIWNFT NPGVVSHNEI
601: LEMYKSYIEP GFKWSNFTVE EQAKVIVAPR SNNEMDGAKL SKEFPEMLPI KEALIKYVFE PNKRT

Best Arabidopsis Sequence Match ( AT1G53500.1 )
(BLAST)

001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT

Arabidopsis Description

RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [extracellular,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.