Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69000 | Canola | cytosol | 67.35 | 19.7 |
| CDY49193 | Canola | cytosol | 70.41 | 19.66 |
| CDY47346 | Canola | cytosol | 70.41 | 19.66 |
| CDY31278 | Canola | cytosol | 68.37 | 19.09 |
| CDY21065 | Canola | cytosol | 67.35 | 18.8 |
| CDY47846 | Canola | golgi | 54.08 | 15.45 |
| CDY08378 | Canola | golgi | 54.08 | 15.36 |
| CDY50431 | Canola | cytosol | 54.08 | 15.23 |
| CDY03506 | Canola | cytosol, golgi | 52.04 | 14.66 |
| CDY47611 | Canola | golgi | 52.04 | 14.66 |
| CDY40862 | Canola | cytosol, golgi | 51.02 | 14.41 |
| CDX86828 | Canola | golgi | 51.02 | 14.41 |
| CDY71965 | Canola | cytosol, mitochondrion | 28.57 | 11.76 |
| CDY60264 | Canola | plastid | 68.37 | 10.97 |
| CDX82768 | Canola | mitochondrion | 28.57 | 6.81 |
| CDX78998 | Canola | mitochondrion | 28.57 | 6.81 |
| CDY29113 | Canola | golgi | 27.55 | 6.55 |
| CDY49015 | Canola | golgi | 27.55 | 6.55 |
| CDY49498 | Canola | golgi | 27.55 | 6.55 |
| CDY02312 | Canola | mitochondrion | 27.55 | 6.43 |
| CDY09555 | Canola | mitochondrion | 27.55 | 6.43 |
| CDY52524 | Canola | golgi | 27.55 | 6.37 |
| CDY31644 | Canola | golgi | 27.55 | 6.37 |
| CDY13102 | Canola | golgi | 26.53 | 6.31 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 14.29 | 3.26 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 14.29 | 3.26 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 14.29 | 3.23 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 14.29 | 3.22 |
| CDX77481 | Canola | endoplasmic reticulum | 14.29 | 3.09 |
| CDX85133 | Canola | endoplasmic reticulum | 14.29 | 3.07 |
| CDX92990 | Canola | endoplasmic reticulum | 14.29 | 3.07 |
| CDY64583 | Canola | endoplasmic reticulum | 14.29 | 3.04 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 14.29 | 3.04 |
| CDY72469 | Canola | cytosol | 4.08 | 3.03 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 13.27 | 3.02 |
| CDY53207 | Canola | endoplasmic reticulum | 13.27 | 2.86 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 12.24 | 2.76 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 12.24 | 2.76 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 11.22 | 2.57 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 16.33 | 2.39 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 16.33 | 2.39 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 10.2 | 2.33 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 10.2 | 2.33 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 10.2 | 2.33 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 10.2 | 2.33 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 15.31 | 2.32 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 15.31 | 2.32 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 16.33 | 2.26 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 14.29 | 2.18 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 14.29 | 2.17 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 13.27 | 1.95 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 13.27 | 1.95 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 13.27 | 1.95 |
| CDX81794 | Canola | plastid | 6.12 | 1.73 |
| CDY45471 | Canola | cytosol | 4.08 | 1.35 |
| CDY45969 | Canola | cytosol | 4.08 | 1.35 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.08 | 1.24 |
| CDX98052 | Canola | cytosol | 4.08 | 1.24 |
| CDY71423 | Canola | cytosol, nucleus | 5.1 | 1.16 |
Protein Annotations
| EnsemblPlants:CDY49495 | EnsemblPlantsGene:GSBRNA2T00093160001 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR43725 |
| PANTHER:PTHR43725:SF9 | ProteinID:CDY49495 | ProteinID:CDY49495.1 | SUPFAM:SSF51735 | UniParc:UPI0004EC2090 | UniProt:A0A078IF30 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC07g18040DBnaC07g18040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IF30]
Coordinates
chrLK032836:-:93937..94327
Molecular Weight (calculated)
10964.2 Da
IEP (calculated)
6.673
GRAVY (calculated)
-0.026
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MIPISFSIAR DIPATEPEWR IIPLRHFNPI GAHESGRIGE YSKGIPNNLM TYIQQVPVGR FPELNVFGHD YPTQDGSAIH GTLYALSNHL CLSGFLLF
001: MGSSVEQNIL VTGGAGFIGT HTVVQLLNQG FKVTIIDNLD NSVVEAVHRV RELVGPDLST KLEFNLGDLR NKGDIEKLFS NQRFDAVIHF AGLKAVGESV
101: GNPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEIVPCVEDF ELQAMNPYGR TKLFLEEIAR DIHAAEPEWK IILLRYFNPV GAHESGRIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVFGHD YPTMDGSAVR DYIHVMDLAD GHVAALNKLF SDSKIGCTAY NLGTGQGTSV LEMVSSFEKA SGKKIPIKLC
301: PRRAGDATAV YASTQKAEKE LGWKAKYGVD EMCRDQWNWA NKNPWGFQKK P
101: GNPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEIVPCVEDF ELQAMNPYGR TKLFLEEIAR DIHAAEPEWK IILLRYFNPV GAHESGRIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVFGHD YPTMDGSAVR DYIHVMDLAD GHVAALNKLF SDSKIGCTAY NLGTGQGTSV LEMVSSFEKA SGKKIPIKLC
301: PRRAGDATAV YASTQKAEKE LGWKAKYGVD EMCRDQWNWA NKNPWGFQKK P
Arabidopsis Description
UGE3UGE3 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.