CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 4
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31278	Canola	cytosol	55.32	96.3
CDY21065	Canola	cytosol	55.16	96.01
CDY69000	Canola	cytosol	50.74	92.54
CDY49193	Canola	cytosol	52.86	92.02
CDY47346	Canola	cytosol	52.86	92.02
KRH59827	Soybean	extracellular, golgi	48.77	85.14
VIT_02s0025g04210.t01	Wine grape	cytosol	48.61	84.86
KRH41129	Soybean	nucleus	48.45	84.57
GSMUA_Achr1P18740_001	Banana	cytosol	45.99	79.38
PGSC0003DMT400007898	Potato	cytosol	45.5	79.2
Solyc08g080570.2.1	Tomato	cytosol	45.5	79.2
GSMUA_Achr5P13620_001	Banana	cytosol	44.35	77.21
KXG36042	Sorghum	cytosol	41.57	69.78
Zm00001d021249_P003	Maize	cytosol	41.24	69.42
CDY49495	Canola	cytosol	10.97	68.37
TraesCS5B01G315700.1	Wheat	cytosol	40.75	67.66
TraesCS5A01G314800.1	Wheat	cytosol	40.59	67.39
TraesCS5D01G321100.1	Wheat	cytosol	40.43	66.94
CDY40862	Canola	cytosol, golgi	37.81	66.57
CDX86828	Canola	golgi	37.81	66.57
CDY47611	Canola	golgi	37.81	66.38
CDY50431	Canola	cytosol	37.64	66.09
CDY03506	Canola	cytosol, golgi	37.48	65.8
CDY47846	Canola	golgi	36.82	65.6
CDY08378	Canola	golgi	36.82	65.22
Os09t0526700-01	Rice	cytosol	39.44	64.61
HORVU5Hr1G080860.10	Barley	mitochondrion	40.92	58.96
CDY71965	Canola	cytosol, mitochondrion	14.57	37.4
CDX78998	Canola	mitochondrion	23.24	34.55
CDY49498	Canola	golgi	23.24	34.47
CDX82768	Canola	mitochondrion	23.08	34.31
CDY02312	Canola	mitochondrion	23.57	34.29
CDY09555	Canola	mitochondrion	23.57	34.29
CDY49015	Canola	golgi	23.08	34.22
CDY29113	Canola	golgi	22.91	33.98
CDY13102	Canola	golgi	22.75	33.74
CDY52524	Canola	golgi	22.75	32.78
CDY31644	Canola	golgi	22.59	32.55
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	15.71	22.38
CDY04398	Canola	cytosol, endoplasmic reticulum, golgi	15.55	22.14
CDY18087	Canola	cytosol, endoplasmic reticulum, golgi	16.53	21.96
CDX94504	Canola	cytosol, endoplasmic reticulum, peroxisome	15.55	21.84
CDY64583	Canola	endoplasmic reticulum	16.37	21.74
CDY70926	Canola	cytosol, endoplasmic reticulum, golgi, plastid	15.22	21.68
CDY28188	Canola	cytosol, endoplasmic reticulum, golgi, plastid	15.22	21.68
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	15.38	21.66
CDX92990	Canola	endoplasmic reticulum	16.04	21.49
CDX77481	Canola	endoplasmic reticulum	15.88	21.41
CDY63064	Canola	cytosol, endoplasmic reticulum, golgi, plastid	15.06	21.4
CDX95646	Canola	cytosol, endoplasmic reticulum, golgi, plastid	15.22	21.38
CDY67756	Canola	cytosol, endoplasmic reticulum, golgi, plastid	15.22	21.38
CDY53207	Canola	endoplasmic reticulum	15.88	21.32
CDX85133	Canola	endoplasmic reticulum	15.88	21.27
CDX72242	Canola	cytosol, endoplasmic reticulum, golgi, plastid	14.73	20.93
CDY39205	Canola	cytosol, endoplasmic reticulum, golgi, plastid	14.73	20.93
CDY25850	Canola	cytosol, mitochondrion, peroxisome	13.09	18.69
CDY35137	Canola	cytosol, mitochondrion, plastid	14.89	13.58
CDY40003	Canola	cytosol, mitochondrion, plastid	14.89	13.58
CDY45116	Canola	cytosol, mitochondrion, peroxisome	14.24	13.08
CDY24092	Canola	cytosol, mitochondrion, peroxisome	14.24	13.08
CDY60210	Canola	cytosol, mitochondrion, peroxisome	14.24	13.02
CDX88455	Canola	cytosol, peroxisome, plastid	14.89	12.87
CDY32340	Canola	cytosol, mitochondrion, peroxisome	13.42	12.75
CDY20084	Canola	cytosol, mitochondrion, peroxisome	13.42	12.73
CDX98494	Canola	cytosol, mitochondrion, plastid	13.26	12.54
CDX97601	Canola	cytosol, mitochondrion, plastid	13.26	12.54
CDX81794	Canola	plastid	4.09	7.2
CDY71423	Canola	cytosol, nucleus	4.09	5.8
CDY72469	Canola	cytosol	1.15	5.3
CDY45471	Canola	cytosol	2.29	4.71
CDY45969	Canola	cytosol	2.29	4.71
CDY57072	Canola	cytosol, extracellular, peroxisome	2.45	4.64
CDX98052	Canola	cytosol	2.13	4.02

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	Gene3D:1.10.150.20	MapMan:13.3.6.5.1.4.1	MapMan:3.13.8	Gene3D:3.40.50.720
Gene3D:3.90.25.10	GO:A0A078J6S7	UniProt:A0A078J6S7	EnsemblPlants:CDY60264	ProteinID:CDY60264	ProteinID:CDY60264.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150
GO:GO:0008152	GO:GO:0016853	EnsemblPlantsGene:GSBRNA2T00028395001	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363
PANTHER:PTHR43725	PANTHER:PTHR43725:SF9	MetaCyc:PWY-3821	MetaCyc:PWY-6317	MetaCyc:PWY-6397	MetaCyc:PWY-6527
MetaCyc:PWY-7328	MetaCyc:PWY-7344	InterPro:RuvA_2-like	SUPFAM:SSF47781	SUPFAM:SSF51735	TIGRFAMs:TIGR01179
InterPro:UDP_G4E	UniPathway:UPA00214	UniParc:UPI0004EECD9B	:	:	:

Description

BnaC05g49280DBnaC05g49280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6S7]

Coordinates

chrLK033861:+:19236..24158

Molecular Weight (calculated)

67728.1 Da

IEP (calculated)

7.717

GRAVY (calculated)

-0.217

Length

611 amino acids

Sequence
(BLAST)

001: MATSGSSHGP STDQPPPSLP NSGSAAGVCI MSNAWKDEQD PSLISFISAF LGSNSFRLNF VSISPDLIFN CGGVSIAFVF VTKWDDCCNV GSIFNRVKRL
101: KAQFARLYVV ATLSTKEQDD SFMRSYFHFS IRYEMEFGKP AFVLVTDPEM GFEKIVKIST SRGMCKQQKV ASKVKVERKR AVQDTDTFIR VLTSIPNINK
201: HDANSLYLAI GSIEAAAKTS KEDILANTDL SSDKADSLSR DSLKVQKVSI LFSKLLEFVE MGSSVEQNIL VTGGAGFIGT HTVVQLLKEG FKVSIIDNLD
301: NSVIEAVDRV RELVGPDLSN KLEFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV GNPRRYFDNN LVGTINLYEA MAKYHCKMMV FSSSATVYGQ
401: PEKIPCVEDF ELKAMNPYGR TKLFLEEIAR DIHAAEPEWR IVLLRYFNPV GAHESGRIGE DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR
501: DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGRGTSV LEMVAAFEKA SGKKIPIKLC PRRAGDATAV YASTERAEKE LGWKAKYGVD EMCRDQWNWA
601: NNNPWGYQKK L

Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L

Arabidopsis Description

UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.