Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019776.1-P | Field mustard | cytosol | 94.43 | 95.02 |
| CDY45471 | Canola | cytosol | 83.9 | 91.25 |
| CDY45969 | Canola | cytosol | 83.59 | 90.91 |
| CDX98052 | Canola | cytosol | 90.71 | 90.71 |
| AT1G63000.1 | Thale cress | cytosol | 83.9 | 90.03 |
| VIT_02s0025g04610.t01 | Wine grape | cytosol | 78.95 | 84.44 |
| TraesCS6D01G238800.1 | Wheat | peroxisome | 78.02 | 84.0 |
| TraesCS6A01G257500.1 | Wheat | peroxisome | 77.71 | 83.67 |
| PGSC0003DMT400058533 | Potato | cytosol | 77.71 | 83.39 |
| TraesCS6B01G267600.1 | Wheat | peroxisome | 77.4 | 83.33 |
| KRH77471 | Soybean | cytosol, endoplasmic reticulum | 71.52 | 83.09 |
| EES07456 | Sorghum | cytosol, peroxisome, plastid | 78.02 | 82.08 |
| Solyc08g080140.2.1 | Tomato | extracellular | 75.54 | 81.06 |
| GSMUA_Achr1P03840_001 | Banana | cytosol | 75.85 | 80.07 |
| Zm00001d017601_P001 | Maize | extracellular, peroxisome | 75.54 | 79.48 |
| GSMUA_Achr5P10430_001 | Banana | cytosol | 75.23 | 79.41 |
| Os02t0678400-01 | Rice | plasma membrane | 76.16 | 79.1 |
| HORVU6Hr1G065690.1 | Barley | peroxisome, plastid | 77.71 | 78.68 |
| CDY72469 | Canola | cytosol | 27.55 | 67.42 |
| CDY71423 | Canola | cytosol, nucleus | 72.76 | 54.52 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 72.14 | 36.24 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 71.83 | 35.91 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 71.83 | 35.91 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 71.21 | 35.71 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 73.06 | 35.49 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 73.37 | 35.37 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 72.76 | 35.34 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 72.76 | 35.07 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 72.45 | 35.03 |
| CDX81794 | Canola | plastid | 36.53 | 34.01 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 74.3 | 33.95 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 12.69 | 9.58 |
| CDY71965 | Canola | cytosol, mitochondrion | 3.72 | 5.04 |
| CDX77481 | Canola | endoplasmic reticulum | 6.81 | 4.86 |
| CDX85133 | Canola | endoplasmic reticulum | 6.81 | 4.82 |
| CDY53207 | Canola | endoplasmic reticulum | 6.5 | 4.62 |
| CDX92990 | Canola | endoplasmic reticulum | 6.5 | 4.61 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 6.19 | 4.6 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 6.19 | 4.6 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.88 | 4.42 |
| CDY50431 | Canola | cytosol | 4.64 | 4.31 |
| CDY49193 | Canola | cytosol | 4.64 | 4.27 |
| CDY31278 | Canola | cytosol | 4.64 | 4.27 |
| CDY47346 | Canola | cytosol | 4.64 | 4.27 |
| CDY21065 | Canola | cytosol | 4.64 | 4.27 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 5.57 | 4.2 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 5.57 | 4.2 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.57 | 4.19 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.57 | 4.19 |
| CDY69000 | Canola | cytosol | 4.33 | 4.18 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 5.57 | 4.14 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 5.88 | 4.13 |
| CDY64583 | Canola | endoplasmic reticulum | 5.88 | 4.13 |
| CDY47846 | Canola | golgi | 4.33 | 4.08 |
| CDY49495 | Canola | cytosol | 1.24 | 4.08 |
| CDY03506 | Canola | cytosol, golgi | 4.33 | 4.02 |
| CDY47611 | Canola | golgi | 4.33 | 4.02 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.26 | 3.96 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.26 | 3.96 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 5.26 | 3.92 |
| CDY08378 | Canola | golgi | 4.02 | 3.77 |
| CDY40862 | Canola | cytosol, golgi | 4.02 | 3.75 |
| CDX86828 | Canola | golgi | 4.02 | 3.75 |
| CDX78998 | Canola | mitochondrion | 4.64 | 3.65 |
| CDX82768 | Canola | mitochondrion | 4.33 | 3.41 |
| CDY13102 | Canola | golgi | 4.33 | 3.4 |
| CDY29113 | Canola | golgi | 4.02 | 3.16 |
| CDY49015 | Canola | golgi | 4.02 | 3.16 |
| CDY49498 | Canola | golgi | 4.02 | 3.16 |
| CDY52524 | Canola | golgi | 4.02 | 3.07 |
| CDY31644 | Canola | golgi | 4.02 | 3.07 |
| CDY09555 | Canola | mitochondrion | 3.72 | 2.86 |
| CDY02312 | Canola | mitochondrion | 3.72 | 2.86 |
| CDY60264 | Canola | plastid | 4.64 | 2.45 |
Protein Annotations
| EnsemblPlants:CDY57072 | EnsemblPlantsGene:GSBRNA2T00020531001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:RmlD-like-bd | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF405 | PFAM:PF04321 | ProteinID:CDY57072 | ProteinID:CDY57072.1 | SUPFAM:SSF51735 | UniParc:UPI0004EAD119 |
| UniProt:A0A078J412 | MapMan:3.13.6.1 | : | : | : | : |
Description
BnaCnng31530DBnaCnng31530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J412]
Coordinates
chrLK033545:+:20983..22316
Molecular Weight (calculated)
36217.3 Da
IEP (calculated)
5.806
GRAVY (calculated)
-0.233
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDPNSLFLF FAGEIFNQFT TERMGAEANG SSSSLNFLIY GRTGWIGGIL GKLCAAQGIP YTYGSGRLED RRSLVADLDS VKPSHVFNAA GVTGRPNVDW
101: CESHKVETIR TNVVGTLTLA DVCKERGLVL INYATGCIFE YDSGHPLGSG LGFKEEDTPN FTGSFYSKTK AMVEELLKNY ENVCTLRVRM PISSDLSNPR
201: NFITKITRYE KVVDIPNSMT ILDELLPISL EMAKRNLTGI WNFTNPGVVS HNEILEMYRE FVDPSFTWKN FTLEEQAKVI VAPRSNNELD ATKLKTEFPE
301: MLSIKESLVK FVFEPNKKTE IKG
101: CESHKVETIR TNVVGTLTLA DVCKERGLVL INYATGCIFE YDSGHPLGSG LGFKEEDTPN FTGSFYSKTK AMVEELLKNY ENVCTLRVRM PISSDLSNPR
201: NFITKITRYE KVVDIPNSMT ILDELLPISL EMAKRNLTGI WNFTNPGVVS HNEILEMYRE FVDPSFTWKN FTLEEQAKVI VAPRSNNELD ATKLKTEFPE
301: MLSIKESLVK FVFEPNKKTE IKG
001: MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
Arabidopsis Description
NRS/ERBifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.