Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P03840_001 | Banana | cytosol | 91.18 | 91.18 |
| GSMUA_Achr4P29070_001 | Banana | cytosol | 18.95 | 87.88 |
| EES07456 | Sorghum | cytosol, peroxisome, plastid | 87.91 | 87.62 |
| TraesCS6A01G257500.1 | Wheat | peroxisome | 85.29 | 87.0 |
| TraesCS6D01G238800.1 | Wheat | peroxisome | 85.29 | 87.0 |
| Zm00001d017601_P001 | Maize | extracellular, peroxisome | 87.25 | 86.97 |
| TraesCS6B01G267600.1 | Wheat | peroxisome | 84.97 | 86.67 |
| CDY45969 | Canola | cytosol | 79.41 | 81.82 |
| HORVU6Hr1G065690.1 | Barley | peroxisome, plastid | 85.29 | 81.82 |
| VIT_02s0025g04610.t01 | Wine grape | cytosol | 80.72 | 81.79 |
| Os02t0678400-01 | Rice | plasma membrane | 83.01 | 81.67 |
| Bra027005.1-P | Field mustard | cytosol | 79.08 | 81.48 |
| CDY45471 | Canola | cytosol | 78.76 | 81.14 |
| PGSC0003DMT400058533 | Potato | cytosol | 79.08 | 80.4 |
| AT1G63000.1 | Thale cress | cytosol | 79.08 | 80.4 |
| Solyc08g080140.2.1 | Tomato | extracellular | 77.45 | 78.74 |
| KRH77471 | Soybean | cytosol, endoplasmic reticulum | 70.59 | 77.7 |
| Bra019776.1-P | Field mustard | cytosol | 79.08 | 75.39 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 79.41 | 75.23 |
| CDX98052 | Canola | cytosol | 76.47 | 72.45 |
| GSMUA_Achr4P29060_001 | Banana | cytosol | 42.48 | 59.36 |
| GSMUA_Achr4P02550_001 | Banana | mitochondrion | 75.49 | 50.66 |
| GSMUA_Achr3P31810_001 | Banana | cytosol, mitochondrion, peroxisome | 76.14 | 37.52 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 76.47 | 36.79 |
| GSMUA_Achr4P10430_001 | Banana | cytosol, extracellular, mitochondrion | 75.16 | 35.44 |
| GSMUA_Achr3P31820_001 | Banana | cytosol, mitochondrion, plastid | 61.44 | 31.07 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, nucleus | 4.9 | 3.9 |
| GSMUA_Achr9P13500_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 5.23 | 3.86 |
| GSMUA_Achr3P23390_001 | Banana | mitochondrion | 5.23 | 3.84 |
| GSMUA_Achr4P02040_001 | Banana | endoplasmic reticulum | 4.9 | 3.71 |
| GSMUA_Achr5P13620_001 | Banana | cytosol | 4.25 | 3.7 |
| GSMUA_Achr11P... | Banana | cytosol, golgi | 4.58 | 3.58 |
| GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, golgi | 4.58 | 3.46 |
| GSMUA_Achr3P04850_001 | Banana | endoplasmic reticulum | 4.58 | 3.38 |
| GSMUA_Achr8P08790_001 | Banana | endoplasmic reticulum, nucleus, peroxisome | 4.9 | 3.38 |
| GSMUA_Achr4P17900_001 | Banana | endoplasmic reticulum, mitochondrion, peroxisome | 4.58 | 3.26 |
| GSMUA_Achr4P02670_001 | Banana | golgi | 3.59 | 3.15 |
| GSMUA_Achr9P00170_001 | Banana | extracellular, golgi | 3.59 | 3.15 |
| GSMUA_Achr8P33320_001 | Banana | mitochondrion | 4.25 | 3.12 |
| GSMUA_Achr11P... | Banana | mitochondrion | 4.25 | 3.12 |
| GSMUA_Achr1P18740_001 | Banana | cytosol | 3.59 | 3.11 |
| GSMUA_Achr5P09200_001 | Banana | golgi | 3.59 | 3.1 |
| GSMUA_Achr8P27530_001 | Banana | cytosol, golgi, plastid | 4.25 | 3.07 |
| GSMUA_Achr7P16250_001 | Banana | cytosol, endoplasmic reticulum, golgi | 4.9 | 2.94 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 4.25 | 2.93 |
| GSMUA_Achr4P31860_001 | Banana | mitochondrion | 3.92 | 2.88 |
| GSMUA_Achr6P22620_001 | Banana | golgi, mitochondrion | 3.27 | 2.87 |
| GSMUA_Achr3P16370_001 | Banana | golgi, mitochondrion, plastid | 3.92 | 2.77 |
| GSMUA_Achr8P00950_001 | Banana | cytosol, endoplasmic reticulum, golgi | 3.92 | 2.71 |
| GSMUA_Achr7P02740_001 | Banana | endoplasmic reticulum | 3.92 | 2.47 |
| GSMUA_Achr5P04690_001 | Banana | endoplasmic reticulum, golgi, nucleus | 3.59 | 2.38 |
| GSMUA_Achr9P06140_001 | Banana | plastid | 3.92 | 2.3 |
| GSMUA_Achr5P18760_001 | Banana | endoplasmic reticulum, golgi, mitochondrion | 3.27 | 2.18 |
| GSMUA_Achr6P26620_001 | Banana | plastid | 3.27 | 1.86 |
| GSMUA_Achr5P25290_001 | Banana | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P10430_001 | EnsemblPlants:GSMUA_Achr5T10430_001 | EnsemblPlantsGene:GSMUA_Achr5G10430_001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:RmlD-like-bd |
| PANTHER:PTHR10366 | PANTHER:PTHR10366:SF405 | PFAM:PF04321 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000296775B |
| UniProt:M0SXC2 | MapMan:3.13.6.1 | : | : | : | : |
Description
Probable rhamnose biosynthetic enzyme 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G10430_001]
Coordinates
chr5:+:7454145..7456911
Molecular Weight (calculated)
34187.0 Da
IEP (calculated)
5.795
GRAVY (calculated)
-0.226
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLTTENGST AAGKEASGFK FLIYGRTGWI GGLLGGLCTE RGIPFVYGDG RLENRAQLEA DITAASPTHV FNAAGVTGRP NVDWCETHRV ETIRANVVGT
101: LTLADVCRER GLILVNYATG CIFEYDGAHP LDSGVGFKEE DTPNFVGSFY SKTKAMVEEL LKNYENVCTL RVRMPISTDL LNPRNFITKI TRYEKVVNIP
201: NSMTILDELL PISIEMAKRN LTGIWNFTNP GVVSHNEILE MYRDYIDPKF TWKNFNLEEQ AKVIVAPRSN NELDTTKLKG EFPELLPIKE SLIKYVFEPN
301: KKTSMA
101: LTLADVCRER GLILVNYATG CIFEYDGAHP LDSGVGFKEE DTPNFVGSFY SKTKAMVEEL LKNYENVCTL RVRMPISTDL LNPRNFITKI TRYEKVVNIP
201: NSMTILDELL PISIEMAKRN LTGIWNFTNP GVVSHNEILE MYRDYIDPKF TWKNFNLEEQ AKVIVAPRSN NELDTTKLKG EFPELLPIKE SLIKYVFEPN
301: KKTSMA
001: MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
Arabidopsis Description
NRS/ERBifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.