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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, golgi, endoplasmic reticulum, plastid

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • endoplasmic reticulum 2
  • plastid 2
  • extracellular 1
  • golgi 2
  • plasma membrane 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, golgi, plastid
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P04850_001 Banana endoplasmic reticulum 90.6 90.82
GSMUA_Achr4P02040_001 Banana endoplasmic reticulum 88.19 90.59
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, golgi 84.1 86.17
Os02t0791500-01 Rice endoplasmic reticulum, golgi, plastid 83.13 78.95
EES05940 Sorghum endoplasmic reticulum, golgi, plastid 82.89 78.36
Zm00001d018350_P001 Maize plasma membrane 82.17 77.68
KRH72376 Soybean endoplasmic reticulum, mitochondrion 80.48 77.49
TraesCS6D01G335600.1 Wheat plastid 81.69 77.4
TraesCS6B01G385900.1 Wheat plastid 81.69 77.4
TraesCS6A01G353200.1 Wheat plastid 81.69 77.4
KRH02967 Soybean nucleus 80.24 77.26
AT4G30440.1 Thale cress cytosol, endoplasmic reticulum, golgi, plastid 79.28 76.69
TraesCS7D01G154100.1 Wheat golgi 80.0 76.67
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 79.28 76.51
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 79.04 76.46
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 79.04 76.46
Bra011194.1-P Field mustard cytosol, endoplasmic reticulum, golgi, plastid 79.04 76.46
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 79.04 76.28
Zm00001d037087_P001 Maize endoplasmic reticulum 80.72 76.14
OQU75981 Sorghum endoplasmic reticulum 80.48 75.91
TraesCS7A01G152300.1 Wheat endoplasmic reticulum 80.96 75.85
HORVU7Hr1G031270.1 Barley endoplasmic reticulum 80.72 75.62
TraesCS7B01G056200.1 Wheat endoplasmic reticulum, golgi, peroxisome 80.72 75.62
Bra024075.1-P Field mustard cytosol, endoplasmic reticulum, golgi, plastid 78.31 75.58
PGSC0003DMT400029181 Potato cytosol, golgi, peroxisome 76.63 74.82
Zm00001d045078_P001 Maize extracellular, golgi 74.46 74.82
PGSC0003DMT400020223 Potato endoplasmic reticulum 77.11 74.25
Solyc07g006220.1.1 Tomato nucleus 75.9 74.12
Os06t0187200-01 Rice golgi, peroxisome 54.7 73.46
Solyc12g010540.1.1 Tomato endoplasmic reticulum 75.66 72.69
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi, nucleus 65.78 70.91
GSMUA_Achr7P16250_001 Banana cytosol, endoplasmic reticulum, golgi 85.3 69.28
GSMUA_Achr4P17900_001 Banana endoplasmic reticulum, mitochondrion, peroxisome 61.69 59.53
GSMUA_Achr5P18760_001 Banana endoplasmic reticulum, golgi, mitochondrion 63.37 57.3
GSMUA_Achr8P00950_001 Banana cytosol, endoplasmic reticulum, golgi 59.52 55.76
GSMUA_Achr8P08790_001 Banana endoplasmic reticulum, nucleus, peroxisome 59.28 55.41
GSMUA_AchrUn_... Banana endoplasmic reticulum 58.55 54.85
GSMUA_Achr7P02740_001 Banana endoplasmic reticulum 59.76 51.13
GSMUA_Achr5P25290_001 Banana mitochondrion 13.49 48.28
GSMUA_Achr5P04690_001 Banana endoplasmic reticulum, golgi, nucleus 43.86 39.39
GSMUA_Achr4P02670_001 Banana golgi 20.72 24.64
GSMUA_Achr5P13620_001 Banana cytosol 20.24 23.93
GSMUA_Achr1P18740_001 Banana cytosol 20.24 23.73
GSMUA_Achr9P00170_001 Banana extracellular, golgi 19.52 23.21
GSMUA_Achr6P22620_001 Banana golgi, mitochondrion 19.52 23.21
GSMUA_Achr11P... Banana cytosol, golgi 21.45 22.76
GSMUA_Achr5P09200_001 Banana golgi 19.04 22.25
GSMUA_Achr8P33320_001 Banana mitochondrion 22.17 22.06
GSMUA_Achr11P... Banana mitochondrion 21.2 21.1
GSMUA_Achr3P23390_001 Banana mitochondrion 20.96 20.86
GSMUA_Achr4P31860_001 Banana mitochondrion 19.52 19.47
GSMUA_Achr8P27530_001 Banana cytosol, golgi, plastid 18.31 17.92
GSMUA_Achr3P16370_001 Banana golgi, mitochondrion, plastid 18.31 17.55
GSMUA_Achr9P06140_001 Banana plastid 20.0 15.93
GSMUA_Achr6P26620_001 Banana plastid 19.52 15.08
GSMUA_Achr4P10430_001 Banana cytosol, extracellular, mitochondrion 19.52 12.48
GSMUA_Achr3P31820_001 Banana cytosol, mitochondrion, plastid 16.87 11.57
GSMUA_Achr3P31810_001 Banana cytosol, mitochondrion, peroxisome 17.11 11.43
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 17.35 11.32
GSMUA_Achr4P29070_001 Banana cytosol 1.2 7.58
GSMUA_Achr4P02550_001 Banana mitochondrion 7.23 6.58
GSMUA_Achr4P29060_001 Banana cytosol 3.13 5.94
GSMUA_Achr5P10430_001 Banana cytosol 3.86 5.23
GSMUA_Achr1P03840_001 Banana cytosol 3.37 4.58
Protein Annotations
MapMan:3.13.4.1Gene3D:3.40.50.720Gene3D:3.90.25.10InterPro:Epimerase_deHydtaseGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016857GO:GO:0050662EnsemblPlantsGene:GSMUA_Achr9G13500_001EnsemblPlants:GSMUA_Achr9P13500_001EnsemblPlants:GSMUA_Achr9T13500_001
UniProt:M0U008InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfInterPro:Nuc_sugar_epimPFAM:PF01370PFAM:PF16363
PRINTS:PR01713PANTHER:PTHR43574PANTHER:PTHR43574:SF17SUPFAM:SSF51735TMHMM:TMhelixUniParc:UPI000294C5A2
SEG:seg:::::
Description
UDP-glucuronate 4-epimerase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G13500_001]
Coordinates
chr9:+:8770077..8771411
Molecular Weight (calculated)
45604.6 Da
IEP (calculated)
10.081
GRAVY (calculated)
-0.162
Length
415 amino acids
Sequence
(BLAST)
001: MMRLMEAELF PSTPGKVKIE RAHTINRQFN RCFASTSTMF LWALFLIALT ASYLSFQSFV DTSSRYFNAS WGGMHWEKQI RASATVRRPG GMSVLVTGAA
101: GFVGTHVSLA LRKRGDGVVG LDNFNSYYDP SLKKAREALL ESHGVFVVEG DIDDARLLAK LFDVVPFTHV MHLAAQAGVR YAIENPASYV HSNIAGLKAP
201: FSEADRTDRP ASLYAATKKA GEEITHTYNH IYGLSITGLR FFTVYGPWGR PDMAYFSFTR NILQGKPITV YRGKNRVDLA RDFTFIDDIV KGCVASLDTA
301: EKSTGSGGRK GSPAQYRIYN LGNTSPVTVP ALVGILERHL KVKAKKNVVE MPGNGDVPFT HANISLARAE LGYKPTTNLE TGLKKFVRWY LSYYGYSPRS
401: GGSAAEATTG SAKSL
Best Arabidopsis Sequence Match ( AT4G30440.1 )
(BLAST)
001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
Arabidopsis Description
GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [cytosol,golgi,endoplasmic reticulum,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.