Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- endoplasmic reticulum 3
- plastid 1
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P13500_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 90.82 | 90.6 |
| GSMUA_Achr4P02040_001 | Banana | endoplasmic reticulum | 88.41 | 90.59 |
| GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, golgi | 83.33 | 85.19 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 81.4 | 78.55 |
| Bra011194.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi, plastid | 81.16 | 78.32 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 81.16 | 78.32 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 81.16 | 78.32 |
| Os02t0791500-01 | Rice | endoplasmic reticulum, golgi, plastid | 82.37 | 78.03 |
| KRH02967 | Soybean | nucleus | 80.68 | 77.49 |
| KRH72376 | Soybean | endoplasmic reticulum, mitochondrion | 80.68 | 77.49 |
| EES05940 | Sorghum | endoplasmic reticulum, golgi, plastid | 82.13 | 77.45 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 80.43 | 77.44 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 80.19 | 77.21 |
| Zm00001d018350_P001 | Maize | plasma membrane | 81.4 | 76.77 |
| TraesCS7D01G154100.1 | Wheat | golgi | 80.19 | 76.67 |
| Bra024075.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi, plastid | 79.47 | 76.51 |
| TraesCS6D01G335600.1 | Wheat | plastid | 80.43 | 76.03 |
| TraesCS6A01G353200.1 | Wheat | plastid | 80.43 | 76.03 |
| TraesCS6B01G385900.1 | Wheat | plastid | 80.43 | 76.03 |
| OQU75981 | Sorghum | endoplasmic reticulum | 80.43 | 75.68 |
| Zm00001d037087_P001 | Maize | endoplasmic reticulum | 80.43 | 75.68 |
| HORVU7Hr1G031270.1 | Barley | endoplasmic reticulum | 80.68 | 75.39 |
| TraesCS7A01G152300.1 | Wheat | endoplasmic reticulum | 80.43 | 75.17 |
| TraesCS7B01G056200.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 80.43 | 75.17 |
| Zm00001d045078_P001 | Maize | extracellular, golgi | 74.4 | 74.58 |
| PGSC0003DMT400029181 | Potato | cytosol, golgi, peroxisome | 76.09 | 74.12 |
| Os06t0187200-01 | Rice | golgi, peroxisome | 54.83 | 73.46 |
| Solyc07g006220.1.1 | Tomato | nucleus | 75.36 | 73.41 |
| PGSC0003DMT400020223 | Potato | endoplasmic reticulum | 76.33 | 73.32 |
| Solyc12g010540.1.1 | Tomato | endoplasmic reticulum | 75.12 | 71.99 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, nucleus | 65.46 | 70.39 |
| GSMUA_Achr7P16250_001 | Banana | cytosol, endoplasmic reticulum, golgi | 84.54 | 68.49 |
| GSMUA_Achr4P17900_001 | Banana | endoplasmic reticulum, mitochondrion, peroxisome | 62.56 | 60.23 |
| GSMUA_Achr5P18760_001 | Banana | endoplasmic reticulum, golgi, mitochondrion | 63.77 | 57.52 |
| GSMUA_Achr8P00950_001 | Banana | cytosol, endoplasmic reticulum, golgi | 60.39 | 56.43 |
| GSMUA_Achr8P08790_001 | Banana | endoplasmic reticulum, nucleus, peroxisome | 59.18 | 55.18 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 58.94 | 55.08 |
| GSMUA_Achr5P25290_001 | Banana | mitochondrion | 14.49 | 51.72 |
| GSMUA_Achr7P02740_001 | Banana | endoplasmic reticulum | 59.9 | 51.13 |
| GSMUA_Achr5P04690_001 | Banana | endoplasmic reticulum, golgi, nucleus | 43.0 | 38.53 |
| GSMUA_Achr4P02670_001 | Banana | golgi | 21.26 | 25.21 |
| GSMUA_Achr1P18740_001 | Banana | cytosol | 20.77 | 24.29 |
| GSMUA_Achr5P13620_001 | Banana | cytosol | 20.53 | 24.22 |
| GSMUA_Achr9P00170_001 | Banana | extracellular, golgi | 20.29 | 24.07 |
| GSMUA_Achr6P22620_001 | Banana | golgi, mitochondrion | 19.81 | 23.5 |
| GSMUA_Achr11P... | Banana | cytosol, golgi | 21.5 | 22.76 |
| GSMUA_Achr5P09200_001 | Banana | golgi | 19.08 | 22.25 |
| GSMUA_Achr8P33320_001 | Banana | mitochondrion | 21.98 | 21.82 |
| GSMUA_Achr3P23390_001 | Banana | mitochondrion | 21.26 | 21.1 |
| GSMUA_Achr11P... | Banana | mitochondrion | 21.26 | 21.1 |
| GSMUA_Achr4P31860_001 | Banana | mitochondrion | 20.53 | 20.43 |
| GSMUA_Achr8P27530_001 | Banana | cytosol, golgi, plastid | 19.32 | 18.87 |
| GSMUA_Achr3P16370_001 | Banana | golgi, mitochondrion, plastid | 19.32 | 18.48 |
| GSMUA_Achr9P06140_001 | Banana | plastid | 20.53 | 16.31 |
| GSMUA_Achr6P26620_001 | Banana | plastid | 20.29 | 15.64 |
| GSMUA_Achr4P10430_001 | Banana | cytosol, extracellular, mitochondrion | 19.81 | 12.63 |
| GSMUA_Achr3P31820_001 | Banana | cytosol, mitochondrion, plastid | 17.87 | 12.23 |
| GSMUA_Achr3P31810_001 | Banana | cytosol, mitochondrion, peroxisome | 17.15 | 11.43 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 17.15 | 11.16 |
| GSMUA_Achr4P02550_001 | Banana | mitochondrion | 6.76 | 6.14 |
| GSMUA_Achr4P29060_001 | Banana | cytosol | 2.9 | 5.48 |
| GSMUA_Achr5P10430_001 | Banana | cytosol | 3.38 | 4.58 |
| GSMUA_Achr4P29070_001 | Banana | cytosol | 0.72 | 4.55 |
| GSMUA_Achr1P03840_001 | Banana | cytosol | 2.9 | 3.92 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016857 | GO:GO:0050662 | EnsemblPlantsGene:GSMUA_Achr3G04850_001 | EnsemblPlants:GSMUA_Achr3P04850_001 | EnsemblPlants:GSMUA_Achr3T04850_001 |
| UniProt:M0SBV3 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF01370 | PFAM:PF16363 |
| PRINTS:PR01713 | PANTHER:PTHR43574 | PANTHER:PTHR43574:SF17 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0002959976 |
Description
UDP-glucuronate 4-epimerase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G04850_001]
Coordinates
chr3:+:3135884..3137215
Molecular Weight (calculated)
45745.9 Da
IEP (calculated)
10.055
GRAVY (calculated)
-0.190
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKEMMGSME DELFPSTPGK VKIERTHAIN RQLHQCFAST STMFLWALFL IALTASYLSF QSFVDSSSRY FDASWGGMQW EKQIRASATV RRPGGFSVLV
101: TGAAGFVGTH VSLALRKRGD GVVGLDNLNS YYDPSLKKAR VALLDSRGVF VVEGDINDAR LLAKLFDVVP FTHVMHLAAQ AGVRYAIENP ASYVHSNIAG
201: LKVPFSESDR TDRPASLYAA TKKAGEEITH TYNHIYGLST TGLRFFTVYG PWGRPDMAYF SFTRNILQGK PITVYRGKDR VDLARDFTYI DDIVKGCVAS
301: LDTAEKSTGT GGRKRGPAQY RIYNLGNTSP VTVPALVGIL EHHLKMKAKR NVVEMPGNGD VPFTHANISL ARAELGYKPT TNLETGLKRF VRWYLLYYGY
401: NTRSGGLAGS AKSL
101: TGAAGFVGTH VSLALRKRGD GVVGLDNLNS YYDPSLKKAR VALLDSRGVF VVEGDINDAR LLAKLFDVVP FTHVMHLAAQ AGVRYAIENP ASYVHSNIAG
201: LKVPFSESDR TDRPASLYAA TKKAGEEITH TYNHIYGLST TGLRFFTVYG PWGRPDMAYF SFTRNILQGK PITVYRGKDR VDLARDFTYI DDIVKGCVAS
301: LDTAEKSTGT GGRKRGPAQY RIYNLGNTSP VTVPALVGIL EHHLKMKAKR NVVEMPGNGD VPFTHANISL ARAELGYKPT TNLETGLKRF VRWYLLYYGY
401: NTRSGGLAGS AKSL
001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
Arabidopsis Description
GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.