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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • golgi 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr1P18740_001
GSMUA_Achr3P16370_001
GSMUA_Achr4P02670_001
GSMUA_Achr5P09200_001
GSMUA_Achr5P13620_001
GSMUA_Achr6P22620_001
GSMUA_Achr6P26620_001
GSMUA_Achr8P27530_001
GSMUA_Achr9P00170_001
GSMUA_Achr9P06140_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G23920.1 GSMUA_Achr1P18740_001 AT1G12780.1 21798944
AT4G23920.1 GSMUA_Achr5P13620_001 AT1G12780.1 21798944
AT4G23920.1 GSMUA_Achr3P16370_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr4P02670_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr5P09200_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr6P22620_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr6P26620_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr8P27530_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr9P00170_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr9P06140_001 AT4G10960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P22620_001 Banana golgi, mitochondrion 86.48 87.97
GSMUA_Achr9P00170_001 Banana extracellular, golgi 85.35 86.82
GSMUA_Achr4P02670_001 Banana golgi 82.82 84.24
Bra019257.1-P Field mustard plastid 76.9 78.45
AT4G10960.1 Thale cress golgi 77.46 78.35
PGSC0003DMT400012829 Potato cytosol, extracellular, golgi 76.34 77.87
CDY03506 Canola cytosol, golgi 76.34 77.87
CDY47611 Canola golgi 76.34 77.87
Solyc12g055930.1.1 Tomato cytosol, extracellular, golgi 76.34 77.87
Bra013744.1-P Field mustard cytosol, golgi 76.06 77.59
AT4G23920.1 Thale cress cytosol 76.34 77.43
CDY50431 Canola cytosol 75.77 77.3
AT1G64440.1 Thale cress cytosol, golgi 75.49 77.01
Bra035262.1-P Field mustard golgi 75.21 76.95
CDX86828 Canola golgi 75.21 76.95
CDY40862 Canola cytosol, golgi 75.21 76.95
CDY47846 Canola golgi 73.8 76.38
Bra027732.1-P Field mustard golgi 73.8 76.38
CDY08378 Canola golgi 73.8 75.94
Os09t0323000-01 Rice cytosol 74.37 71.54
TraesCS5D01G188200.1 Wheat plastid 74.65 70.67
TraesCS5B01G181300.1 Wheat plastid 74.65 70.67
TraesCS5A01G183100.1 Wheat plastid 74.65 70.67
HORVU5Hr1G055920.8 Barley plastid 74.37 70.59
EER98731 Sorghum plastid 71.83 69.67
Zm00001d005598_P001 Maize plastid 71.27 69.32
GSMUA_Achr1P18740_001 Banana cytosol 67.32 67.51
GSMUA_Achr8P27530_001 Banana cytosol, golgi, plastid 80.28 67.22
GSMUA_Achr5P13620_001 Banana cytosol 65.92 66.67
Zm00001d020093_P002 Maize golgi 56.62 66.56
Os08t0374800-01 Rice golgi 75.77 65.93
Zm00001d032346_P002 Maize endoplasmic reticulum, golgi, plastid 76.9 64.54
EES14924 Sorghum endoplasmic reticulum, golgi, plastid 76.62 64.3
GSMUA_Achr3P16370_001 Banana golgi, mitochondrion, plastid 78.31 64.2
GSMUA_Achr9P06140_001 Banana plastid 81.13 55.28
GSMUA_Achr6P26620_001 Banana plastid 81.13 53.63
GSMUA_Achr11P... Banana cytosol, golgi 41.97 38.11
GSMUA_Achr4P31860_001 Banana mitochondrion 42.82 36.54
GSMUA_Achr11P... Banana mitochondrion 42.82 36.45
GSMUA_Achr8P33320_001 Banana mitochondrion 42.54 36.21
GSMUA_Achr3P23390_001 Banana mitochondrion 41.97 35.73
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, golgi 22.54 19.75
GSMUA_Achr4P02040_001 Banana endoplasmic reticulum 22.25 19.55
GSMUA_Achr3P04850_001 Banana endoplasmic reticulum 22.25 19.08
GSMUA_Achr9P13500_001 Banana cytosol, endoplasmic reticulum, golgi, plastid 22.25 19.04
GSMUA_Achr5P18760_001 Banana endoplasmic reticulum, golgi, mitochondrion 23.94 18.52
GSMUA_AchrUn_... Banana endoplasmic reticulum 23.1 18.51
GSMUA_Achr8P00950_001 Banana cytosol, endoplasmic reticulum, golgi 22.82 18.28
GSMUA_Achr4P17900_001 Banana endoplasmic reticulum, mitochondrion, peroxisome 21.97 18.14
GSMUA_Achr5P25290_001 Banana mitochondrion 5.92 18.1
GSMUA_Achr8P08790_001 Banana endoplasmic reticulum, nucleus, peroxisome 22.25 17.79
GSMUA_Achr7P02740_001 Banana endoplasmic reticulum 23.38 17.11
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi, nucleus 18.31 16.88
GSMUA_Achr7P16250_001 Banana cytosol, endoplasmic reticulum, golgi 22.54 15.66
GSMUA_Achr4P10430_001 Banana cytosol, extracellular, mitochondrion 23.94 13.1
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 20.28 11.32
GSMUA_Achr3P31810_001 Banana cytosol, mitochondrion, peroxisome 19.72 11.27
GSMUA_Achr5P04690_001 Banana endoplasmic reticulum, golgi, nucleus 14.65 11.26
GSMUA_Achr3P31820_001 Banana cytosol, mitochondrion, plastid 19.15 11.24
GSMUA_Achr4P02550_001 Banana mitochondrion 8.73 6.8
GSMUA_Achr4P29070_001 Banana cytosol 1.13 6.06
GSMUA_Achr5P10430_001 Banana cytosol 3.1 3.59
GSMUA_Achr4P29060_001 Banana cytosol 1.69 2.74
GSMUA_Achr1P03840_001 Banana cytosol 2.25 2.61
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.8Gene3D:3.40.50.720Gene3D:3.90.25.10GO:GO:0003674
GO:GO:0003824GO:GO:0003978GO:GO:0005975GO:GO:0006012GO:GO:0008150GO:GO:0008152
GO:GO:0016853EnsemblPlantsGene:GSMUA_Achr5G09200_001EnsemblPlants:GSMUA_Achr5P09200_001EnsemblPlants:GSMUA_Achr5T09200_001UniProt:M0SWZ9InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sfPFAM:PF16363PANTHER:PTHR43725PANTHER:PTHR43725:SF11SUPFAM:SSF51735TIGRFAMs:TIGR01179
InterPro:UDP_G4EUniParc:UPI0002953AC4::::
Description
UDP-glucose 4-epimerase GEPI48 [Source:GMGC_GENE;Acc:GSMUA_Achr5G09200_001]
Coordinates
chr5:+:6697131..6703279
Molecular Weight (calculated)
38966.7 Da
IEP (calculated)
6.437
GRAVY (calculated)
-0.171
Length
355 amino acids
Sequence
(BLAST)
001: MSRRVLVTGG AGYIGSHTVL QLLLEGFTVV MVDNLDNSSE VAVQRVAELA GDHGKNLSVY QIDIRDREAL ETVFASTKFD AVIHFAGLKA VGESVHKPLL
101: YYKNNIIGTI TLLEVMASHG CKKLVFSSSA TVYGWPKELP CTEESPLCAM NPYGRTKLMI EDICRDIHHA DDEWKIMLLR YFNPVGAHPS GRIGEDPRGI
201: PNNLMPVVQQ VAVGRRPALT VFGNDYSTKD GTGVRDYIHV VDLADGHIAA LQKLFDDPSV GCEVYNLGTG KGTSVLEMVA AFEKASGKKI PLIMAGRRPG
301: DAEILYASTA KAEKELNWKA KYGIEEMCHD QWNWASKNPW GYESPDPANR GSSIL
Best Arabidopsis Sequence Match ( AT4G10960.1 )
(BLAST)
001: MMARNVLVSG GAGYIGSHTV LQLLLGGYSV VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRSA LEKIFSETKF DAVIHFAGLK AVGESVEKPL
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H
Arabidopsis Description
UGE5UDP-glucose 4-epimerase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN58]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.