Factsheet for AT1G64440.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027732.1-P	Field mustard	golgi	91.38	92.71
CDY47846	Canola	golgi	91.38	92.71
CDY08378	Canola	golgi	91.67	92.46
AT4G23920.1	Thale cress	cytosol	79.6	79.14
AT4G10960.1	Thale cress	golgi	79.31	78.63
GSMUA_Achr4P02670_001	Banana	golgi	76.15	75.93
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	75.86	75.86
PGSC0003DMT400012829	Potato	cytosol, extracellular, golgi	75.57	75.57
GSMUA_Achr5P09200_001	Banana	golgi	77.01	75.49
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	75.0	74.79
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	73.85	73.64
AT3G28530.1	Thale cress	cytosol, nucleus	4.89	68.0
Os09t0323000-01	Rice	cytosol	71.55	67.48
EER98731	Sorghum	plastid	69.54	66.12
TraesCS5A01G183100.1	Wheat	plastid	70.69	65.6
TraesCS5B01G181300.1	Wheat	plastid	70.69	65.6
TraesCS5D01G188200.1	Wheat	plastid	70.69	65.6
Zm00001d005598_P001	Maize	plastid	68.68	65.48
HORVU5Hr1G055920.8	Barley	plastid	70.11	65.24
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	64.08	63.53
Zm00001d020093_P002	Maize	golgi	54.6	62.91
AT1G63180.1	Thale cress	cytosol	62.93	62.39
Os08t0374800-01	Rice	golgi	72.99	62.25
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	74.71	61.32
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	72.13	59.34
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	72.13	59.34
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	73.28	58.89
GSMUA_Achr9P06140_001	Banana	plastid	75.57	50.48
GSMUA_Achr6P26620_001	Banana	plastid	76.44	49.53
AT2G34850.2	Thale cress	cytosol	28.16	41.53
AT4G20460.1	Thale cress	golgi, mitochondrion	41.67	35.28
AT1G30620.4	Thale cress	golgi, mitochondrion	42.24	35.08
AT5G44480.1	Thale cress	mitochondrion	41.67	33.26
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	25.0	19.95
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	24.43	19.81
AT4G00110.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	24.43	19.77
AT1G02000.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	24.14	19.35
AT3G23820.1	Thale cress	endoplasmic reticulum	25.57	19.35
AT2G45310.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	23.56	18.76
AT1G78570.1	Thale cress	cytosol, mitochondrion, peroxisome	26.15	13.6
AT3G14790.2	Thale cress	mitochondrion	25.0	13.04
AT1G53500.1	Thale cress	cytosol, extracellular, peroxisome	24.71	12.89
AT1G63000.1	Thale cress	cytosol	3.74	4.32

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:842752
UniProt:A0A178W7Z8	ProteinID:AAF19668.1	ProteinID:AAG51709.1	ProteinID:AEE34241.1	ArrayExpress:AT1G64440	EnsemblPlantsGene:AT1G64440
RefSeq:AT1G64440	TAIR:AT1G64440	RefSeq:AT1G64440-TAIR-G	EnsemblPlants:AT1G64440.1	TAIR:AT1G64440.1	Unigene:At.25758
EMBL:BT011226	EMBL:BT012154	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005795	GO:GO:0005975
GO:GO:0006012	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009832	GO:GO:0009969	GO:GO:0009987	GO:GO:0010053	GO:GO:0016043	GO:GO:0016853
GO:GO:0030154	GO:GO:0042546	GO:GO:0071555	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_176625.1
ProteinID:OAP14266.1	PFAM:PF16363	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000258
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0005059	PO:PO:0006036	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020124	PO:PO:0020137
PO:PO:0025022	PO:PO:0025181	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR43725	PANTHER:PTHR43725:SF11
UniProt:Q9C7W7	Symbol:RHD1	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI00000A504B
SEG:seg	:	:	:	:	:

Description

UGE4UDP-glucose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W7]

Coordinates

chr1:+:23936975..23939899

Molecular Weight (calculated)

38125.5 Da

IEP (calculated)

5.631

GRAVY (calculated)

-0.208

Length

348 amino acids

Sequence
(BLAST)

001: MVGNILVTGG AGYIGSHTVL QLLLGGYNTV VIDNLDNSSL VSIQRVKDLA GDHGQNLTVH QVDLRDKPAL EKVFSETKFD AVMHFAGLKA VGESVAKPLL
101: YYNNNLIATI TLLEVMAAHG CKKLVFSSSA TVYGWPKEVP CTEESPLSGM SPYGRTKLFI EDICRDVQRG DPEWRIIMLR YFNPVGAHPS GRIGEDPCGT
201: PNNLMPYVQQ VVVGRLPNLK IYGTDYTTKD GTGVRDYIHV VDLADGHICA LQKLDDTEIG CEVYNLGTGK GTTVLEMVDA FEKASGMKIP LVKVGRRPGD
301: AETVYASTEK AERELNWKAN FGIEEMCRDQ WNWASNNPFG YGSSPNST

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.