Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027732.1-P Field mustard golgi 99.13 99.71
CDY47846 Canola golgi 99.13 99.71
AT1G64440.1 Thale cress cytosol, golgi 92.46 91.67
CDY03506 Canola cytosol, golgi 78.84 78.16
CDY47611 Canola golgi 78.26 77.59
CDY50431 Canola cytosol 77.97 77.3
CDX86828 Canola golgi 77.39 76.95
CDY40862 Canola cytosol, golgi 77.1 76.66
GSMUA_Achr4P02670_001 Banana golgi 76.23 75.36
Solyc12g055930.1.1 Tomato cytosol, extracellular, golgi 75.36 74.71
PGSC0003DMT400012829 Potato cytosol, extracellular, golgi 75.07 74.43
GSMUA_Achr6P22620_001 Banana golgi, mitochondrion 75.07 74.21
GSMUA_Achr5P09200_001 Banana golgi 75.94 73.8
GSMUA_Achr9P00170_001 Banana extracellular, golgi 73.91 73.07
EER98731 Sorghum plastid 69.57 65.57
Os09t0323000-01 Rice cytosol 69.57 65.04
CDY69000 Canola cytosol 62.9 64.78
CDY31278 Canola cytosol 65.8 64.67
Zm00001d005598_P001 Maize plastid 68.41 64.66
TraesCS5A01G183100.1 Wheat plastid 70.14 64.53
TraesCS5B01G181300.1 Wheat plastid 70.14 64.53
TraesCS5D01G188200.1 Wheat plastid 70.14 64.53
CDY21065 Canola cytosol 65.51 64.39
HORVU5Hr1G055920.8 Barley plastid 69.57 64.17
CDY47346 Canola cytosol 64.93 63.82
CDY49193 Canola cytosol 64.93 63.82
Os08t0374800-01 Rice golgi 73.04 61.76
Zm00001d020093_P002 Maize golgi 53.91 61.59
GSMUA_Achr8P27530_001 Banana cytosol, golgi, plastid 74.78 60.85
EES14924 Sorghum endoplasmic reticulum, golgi, plastid 72.17 58.87
Zm00001d032346_P002 Maize endoplasmic reticulum, golgi, plastid 72.17 58.87
GSMUA_Achr3P16370_001 Banana golgi, mitochondrion, plastid 73.04 58.2
CDY49495 Canola cytosol 15.36 54.08
GSMUA_Achr9P06140_001 Banana plastid 74.78 49.52
GSMUA_Achr6P26620_001 Banana plastid 75.65 48.6
CDY71965 Canola cytosol, mitochondrion 27.25 39.5
CDY60264 Canola plastid 65.22 36.82
CDY09555 Canola mitochondrion 43.48 35.71
CDY02312 Canola mitochondrion 43.19 35.48
CDY31644 Canola golgi 43.48 35.38
CDX78998 Canola mitochondrion 41.74 35.04
CDY29113 Canola golgi 41.74 34.95
CDY52524 Canola golgi 42.9 34.91
CDX82768 Canola mitochondrion 41.45 34.79
CDY49498 Canola golgi 41.45 34.71
CDY13102 Canola golgi 41.45 34.71
CDY49015 Canola golgi 41.16 34.47
CDX97356 Canola cytosol, endoplasmic reticulum, golgi 25.8 20.75
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.51 20.51
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.51 20.51
CDX77481 Canola endoplasmic reticulum 26.67 20.31
CDY04398 Canola cytosol, endoplasmic reticulum, golgi 25.22 20.28
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.22 20.23
CDX94504 Canola cytosol, endoplasmic reticulum, peroxisome 25.51 20.23
CDY64583 Canola endoplasmic reticulum 26.96 20.22
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 26.96 20.22
CDX85133 Canola endoplasmic reticulum 26.67 20.18
CDX92990 Canola endoplasmic reticulum 26.67 20.18
CDY53207 Canola endoplasmic reticulum 26.38 20.0
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 24.93 20.0
CDX86716 Canola cytosol, endoplasmic reticulum, peroxisome 24.93 19.82
CDY63064 Canola cytosol, endoplasmic reticulum, golgi, plastid 24.64 19.77
CDY67756 Canola cytosol, endoplasmic reticulum, golgi, plastid 24.64 19.54
CDX95646 Canola cytosol, endoplasmic reticulum, golgi, plastid 24.64 19.54
CDY25850 Canola cytosol, mitochondrion, peroxisome 23.19 18.69
CDY40003 Canola cytosol, mitochondrion, plastid 26.67 13.73
CDY35137 Canola cytosol, mitochondrion, plastid 26.67 13.73
CDY24092 Canola cytosol, mitochondrion, peroxisome 25.22 13.08
CDY45116 Canola cytosol, mitochondrion, peroxisome 25.22 13.08
CDY60210 Canola cytosol, mitochondrion, peroxisome 25.22 13.02
CDX88455 Canola cytosol, peroxisome, plastid 26.38 12.87
CDX98494 Canola cytosol, mitochondrion, plastid 24.06 12.85
CDX97601 Canola cytosol, mitochondrion, plastid 24.06 12.85
CDY32340 Canola cytosol, mitochondrion, peroxisome 23.77 12.75
CDY20084 Canola cytosol, mitochondrion, peroxisome 23.77 12.73
CDX81794 Canola plastid 7.83 7.78
CDY71423 Canola cytosol, nucleus 6.96 5.57
CDY72469 Canola cytosol 2.03 5.3
CDY45471 Canola cytosol 3.48 4.04
CDY45969 Canola cytosol 3.48 4.04
CDY57072 Canola cytosol, extracellular, peroxisome 3.77 4.02
CDX98052 Canola cytosol 3.48 3.72
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.8Gene3D:3.40.50.720Gene3D:3.90.25.10GO:A0A078F9C5
UniProt:A0A078F9C5EnsemblPlants:CDY08378ProteinID:CDY08378ProteinID:CDY08378.1GO:GO:0003674GO:GO:0003824
GO:GO:0003978GO:GO:0005975GO:GO:0006012GO:GO:0008150GO:GO:0008152GO:GO:0016853
EnsemblPlantsGene:GSBRNA2T00000108001InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPFAM:PF16363PANTHER:PTHR43725PANTHER:PTHR43725:SF11
MetaCyc:PWY-3821MetaCyc:PWY-6317MetaCyc:PWY-6397MetaCyc:PWY-6527MetaCyc:PWY-7328MetaCyc:PWY-7344
SUPFAM:SSF51735TIGRFAMs:TIGR01179InterPro:UDP_G4EUniPathway:UPA00214UniParc:UPI0004EC74C5SEG:seg
Description
BnaC09g12180DBnaC09g12180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9C5]
Coordinates
chrLK031985:+:697643..699978
Molecular Weight (calculated)
37921.4 Da
IEP (calculated)
6.105
GRAVY (calculated)
-0.210
Length
345 amino acids
Sequence
(BLAST)
001: MVKNILVTGG AGYIGSHAVL QLLLRGYTAV VIDNLDNSSL VSIQRVKELA GDRGDNLTFH QVDLCDKPAL ERLFSQSKFD AVMHFAGLKA VGESVAKPLL
101: YYNNNLIGTI TLLEVMAAHG CKKLVFSSSA TVYGWPKEVP CTEESPLSGM SPYARTKLFI EDICRDVQRG DPEWRIIMLR YFNPVGAHPS GRIGEDPCGT
201: PNNLMPYVQQ VVVGRLPNLK IYGTDYTTKD GTGVRDYIHV VDLADGHISA LQKLEDSEIG CEVYNLGTGK GTTVLEMVDA FEKASGMKIP VVKVGRRPGD
301: AETVYASTEK AEHELNWKPK YGIDEMCRDQ WNWASNNPLG YGSSP
Best Arabidopsis Sequence Match ( AT1G64440.1 )
(BLAST)
001: MVGNILVTGG AGYIGSHTVL QLLLGGYNTV VIDNLDNSSL VSIQRVKDLA GDHGQNLTVH QVDLRDKPAL EKVFSETKFD AVMHFAGLKA VGESVAKPLL
101: YYNNNLIATI TLLEVMAAHG CKKLVFSSSA TVYGWPKEVP CTEESPLSGM SPYGRTKLFI EDICRDVQRG DPEWRIIMLR YFNPVGAHPS GRIGEDPCGT
201: PNNLMPYVQQ VVVGRLPNLK IYGTDYTTKD GTGVRDYIHV VDLADGHICA LQKLDDTEIG CEVYNLGTGK GTTVLEMVDA FEKASGMKIP LVKVGRRPGD
301: AETVYASTEK AERELNWKAN FGIEEMCRDQ WNWASNNPFG YGSSPNST
Arabidopsis Description
UGE4UDP-glucose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W7]
SUBAcon: [golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.