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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 2
  • golgi 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:golgi
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027557.1-P Field mustard golgi 99.03 99.03
CDY29113 Canola golgi 98.06 98.06
CDY49015 Canola golgi 93.2 93.2
CDY49498 Canola golgi 92.23 92.23
AT5G44480.1 Thale cress mitochondrion 93.69 88.53
CDY71965 Canola cytosol, mitochondrion 50.97 88.24
CDX82768 Canola mitochondrion 83.98 84.18
CDX78998 Canola mitochondrion 83.98 84.18
CDY09555 Canola mitochondrion 80.1 78.57
CDY02312 Canola mitochondrion 79.85 78.33
Os04t0618200-02 Rice golgi 74.27 78.26
PGSC0003DMT400080637 Potato golgi 75.49 77.75
KRH43065 Soybean golgi, mitochondrion, plastid 78.16 77.4
KRH11871 Soybean golgi, plastid 77.91 77.35
KRH36892 Soybean golgi, mitochondrion 77.91 77.35
KRH59194 Soybean golgi, mitochondrion 77.91 77.16
Solyc02g030230.2.1 Tomato mitochondrion 77.67 76.92
Solyc02g069580.2.1 Tomato golgi, mitochondrion 77.43 76.5
GSMUA_Achr11P... Banana cytosol, golgi 72.57 76.47
EER95001 Sorghum mitochondrion 75.49 76.41
CDY52524 Canola golgi 78.4 76.18
Os08t0129700-01 Rice mitochondrion 74.76 75.86
PGSC0003DMT400054459 Potato mitochondrion 76.7 75.78
GSMUA_Achr11P... Banana mitochondrion 76.7 75.78
GSMUA_Achr3P23390_001 Banana mitochondrion 76.7 75.78
CDY31644 Canola golgi 77.91 75.71
GSMUA_Achr8P33320_001 Banana mitochondrion 76.46 75.54
KXG27129 Sorghum mitochondrion, plastid 75.0 74.46
TraesCS7D01G307500.1 Wheat golgi, mitochondrion 73.06 74.32
HORVU7Hr1G074300.2 Barley golgi 73.06 74.32
TraesCS7A01G311100.1 Wheat golgi 72.82 74.07
TraesCS2A01G460400.1 Wheat unclear 73.79 73.79
TraesCS2B01G482000.1 Wheat golgi 73.79 73.79
Os07t0139400-01 Rice plasma membrane 75.24 73.63
TraesCS2D01G460600.1 Wheat mitochondrion, plastid 73.54 73.54
TraesCS5D01G298700.1 Wheat mitochondrion 75.0 73.4
TraesCS5A01G291300.1 Wheat golgi 75.0 73.4
GSMUA_Achr4P31860_001 Banana mitochondrion 74.03 73.32
HORVU2Hr1G104110.1 Barley mitochondrion, plastid 73.3 73.3
HORVU5Hr1G077110.3 Barley mitochondrion 74.76 73.16
TraesCS5B01G290300.1 Wheat mitochondrion 74.76 73.16
TraesCS7B01G210700.2 Wheat golgi 73.06 72.88
EER95854 Sorghum mitochondrion, plastid 75.0 71.86
CDY47846 Canola golgi 34.95 41.98
CDY47611 Canola golgi 35.44 41.95
CDX86828 Canola golgi 35.19 41.79
CDY03506 Canola cytosol, golgi 35.19 41.67
CDY40862 Canola cytosol, golgi 34.95 41.5
CDY08378 Canola golgi 34.71 41.45
CDY50431 Canola cytosol 34.71 41.09
CDY69000 Canola cytosol 31.8 39.1
Zm00001d017999_P002 Maize mitochondrion 29.37 38.91
CDY31278 Canola cytosol 33.01 38.75
CDY21065 Canola cytosol 33.01 38.75
CDY47346 Canola cytosol 32.28 37.89
CDY49193 Canola cytosol 32.28 37.89
Zm00001d010657_P001 Maize golgi, plastid, vacuole 31.8 37.86
CDY49495 Canola cytosol 6.31 26.53
CDY60264 Canola plastid 33.74 22.75
CDX97356 Canola cytosol, endoplasmic reticulum, golgi 22.82 21.91
CDY04398 Canola cytosol, endoplasmic reticulum, golgi 22.33 21.45
CDY63064 Canola cytosol, endoplasmic reticulum, golgi, plastid 22.09 21.16
CDX94504 Canola cytosol, endoplasmic reticulum, peroxisome 22.33 21.15
CDX86716 Canola cytosol, endoplasmic reticulum, peroxisome 22.09 20.97
CDX92990 Canola endoplasmic reticulum 22.57 20.39
CDY53207 Canola endoplasmic reticulum 22.33 20.22
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.87 20.0
CDY64583 Canola endoplasmic reticulum 22.33 20.0
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.87 20.0
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 22.33 20.0
CDX77481 Canola endoplasmic reticulum 21.84 19.87
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.63 19.81
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.63 19.81
CDX85133 Canola endoplasmic reticulum 21.84 19.74
CDY67756 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.63 19.54
CDX95646 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.63 19.54
CDY25850 Canola cytosol, mitochondrion, peroxisome 18.93 18.22
CDY24092 Canola cytosol, mitochondrion, peroxisome 20.63 12.78
CDY45116 Canola cytosol, mitochondrion, peroxisome 20.63 12.78
CDY60210 Canola cytosol, mitochondrion, peroxisome 20.63 12.72
CDY40003 Canola cytosol, mitochondrion, plastid 20.39 12.54
CDY35137 Canola cytosol, mitochondrion, plastid 20.39 12.54
CDX88455 Canola cytosol, peroxisome, plastid 21.12 12.31
CDX97601 Canola cytosol, mitochondrion, plastid 19.17 12.23
CDX98494 Canola cytosol, mitochondrion, plastid 19.17 12.23
CDY20084 Canola cytosol, mitochondrion, peroxisome 18.93 12.11
CDY32340 Canola cytosol, mitochondrion, peroxisome 18.69 11.98
CDX81794 Canola plastid 6.8 8.07
CDY71423 Canola cytosol, nucleus 6.07 5.8
CDX98052 Canola cytosol 3.64 4.64
CDY57072 Canola cytosol, extracellular, peroxisome 3.4 4.33
CDY45471 Canola cytosol 2.67 3.7
CDY45969 Canola cytosol 2.67 3.7
CDY72469 Canola cytosol 0.97 3.03
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.7.1Gene3D:3.40.50.720Gene3D:3.90.25.10GO:A0A078FJF1
UniProt:A0A078FJF1EnsemblPlants:CDY13102ProteinID:CDY13102ProteinID:CDY13102.1GO:GO:0003674GO:GO:0003824
GO:GO:0003978GO:GO:0005575GO:GO:0005975GO:GO:0006012GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016853EnsemblPlantsGene:GSBRNA2T00070947001InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sf
PFAM:PF16363PANTHER:PTHR43349PANTHER:PTHR43349:SF14MetaCyc:PWY-3821MetaCyc:PWY-6317MetaCyc:PWY-6397
MetaCyc:PWY-6527MetaCyc:PWY-7328MetaCyc:PWY-7344SUPFAM:SSF51735TIGRFAMs:TIGR01179TMHMM:TMhelix
InterPro:UDP_G4EUniPathway:UPA00214UniParc:UPI0004EEC39CSEG:seg::
Description
BnaA09g17150DBnaA09g17150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJF1]
Coordinates
chrLK032031:-:549586..551785
Molecular Weight (calculated)
45564.9 Da
IEP (calculated)
9.496
GRAVY (calculated)
-0.197
Length
412 amino acids
Sequence
(BLAST)
001: MLTLFGVRNQ RRSSRPLSVG DMDYLEPKTK NSLLGKLLLL ASLVILAIIV ISRSSSFTSP SVFSQREEGV THVLVTGGAG YIGSHAALRL LKDSYRVTIV
101: DNLSRGNLGA VKVLQGLFPQ TGRLQFIYAD LGDPAAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKNSDG
301: TCIRDYIDVT DLVDAHVKAL QKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGAEIKVDF LPRRPGDYAE VYSDPTKILR DLNWTAQYTN LQYSLQVAWR
401: WQKIHPHGYA SY
Best Arabidopsis Sequence Match ( AT5G44480.3 )
(BLAST)
001: MLNSSGVRTQ RRSPRPLSLG EMDCLEPKTK NNLTGKLLLV ASLLILAIIV ISQSSSFTSP SAFSQREEGV THVLVTGGAG YIGSHAALRL LRDSYRVTIV
101: DNLSRGNLGA VKTLQQLFPQ TGRLQFIYAD LGDPLAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL EKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDF LPRRPGDYAE VYSDPTKILK DLNWTARFTN LQDSLQVAWR
401: WQKIHPHGYN SY
Arabidopsis Description
DURPutative UDP-arabinose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI17]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.