Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45969 | Canola | cytosol | 55.45 | 80.47 |
| CDY45471 | Canola | cytosol | 55.22 | 80.13 |
| KRH57441 | Soybean | cytosol | 55.68 | 77.17 |
| GSMUA_Achr4P29070_001 | Banana | cytosol | 11.6 | 75.76 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 54.52 | 72.76 |
| CDX98052 | Canola | cytosol | 53.13 | 70.9 |
| CDY72469 | Canola | cytosol | 18.79 | 61.36 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 97.91 | 59.69 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 89.79 | 57.76 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 89.56 | 57.61 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 83.53 | 55.73 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 83.53 | 55.73 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 82.6 | 55.28 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 81.9 | 54.9 |
| GSMUA_Achr4P29060_001 | Banana | cytosol | 27.84 | 54.79 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 83.76 | 54.29 |
| CDX81794 | Canola | plastid | 43.62 | 54.18 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 83.76 | 54.04 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 83.29 | 53.98 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 35.27 | 35.51 |
| CDY71965 | Canola | cytosol, mitochondrion | 6.26 | 11.34 |
| CDY69000 | Canola | cytosol | 5.8 | 7.46 |
| CDY47846 | Canola | golgi | 5.8 | 7.29 |
| CDY31278 | Canola | cytosol | 5.8 | 7.12 |
| CDY21065 | Canola | cytosol | 5.8 | 7.12 |
| CDY08378 | Canola | golgi | 5.57 | 6.96 |
| CDX86828 | Canola | golgi | 5.57 | 6.92 |
| CDY40862 | Canola | cytosol, golgi | 5.57 | 6.92 |
| CDY50431 | Canola | cytosol | 5.57 | 6.9 |
| CDY47611 | Canola | golgi | 5.34 | 6.61 |
| CDY03506 | Canola | cytosol, golgi | 5.34 | 6.61 |
| CDY49193 | Canola | cytosol | 5.34 | 6.55 |
| CDY47346 | Canola | cytosol | 5.34 | 6.55 |
| CDX77481 | Canola | endoplasmic reticulum | 6.73 | 6.4 |
| CDX85133 | Canola | endoplasmic reticulum | 6.73 | 6.36 |
| CDX78998 | Canola | mitochondrion | 6.03 | 6.33 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 6.26 | 6.22 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 6.26 | 6.21 |
| CDX92990 | Canola | endoplasmic reticulum | 6.5 | 6.14 |
| CDX82768 | Canola | mitochondrion | 5.8 | 6.08 |
| CDY13102 | Canola | golgi | 5.8 | 6.07 |
| CDY49015 | Canola | golgi | 5.8 | 6.07 |
| CDY49498 | Canola | golgi | 5.8 | 6.07 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 6.03 | 6.06 |
| CDY53207 | Canola | endoplasmic reticulum | 6.26 | 5.93 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 5.8 | 5.83 |
| CDY29113 | Canola | golgi | 5.57 | 5.83 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.8 | 5.75 |
| CDY64583 | Canola | endoplasmic reticulum | 6.03 | 5.65 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 6.03 | 5.65 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.57 | 5.52 |
| CDY09555 | Canola | mitochondrion | 5.34 | 5.48 |
| CDY02312 | Canola | mitochondrion | 5.34 | 5.48 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.34 | 5.35 |
| CDY52524 | Canola | golgi | 5.1 | 5.19 |
| CDY31644 | Canola | golgi | 5.1 | 5.19 |
| CDY49495 | Canola | cytosol | 1.16 | 5.1 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.64 | 4.65 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.64 | 4.65 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.41 | 4.43 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.41 | 4.43 |
| CDY60264 | Canola | plastid | 5.8 | 4.09 |
Protein Annotations
| EnsemblPlants:CDY71423 | EnsemblPlantsGene:GSBRNA2T00014739001 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | InterPro:NAD(P)-bd_dom_sf | InterPro:RmlD-like-bd |
| PANTHER:PTHR10366 | PANTHER:PTHR10366:SF405 | PFAM:PF04321 | ProteinID:CDY71423 | ProteinID:CDY71423.1 | SEG:seg |
| SUPFAM:SSF51735 | UniParc:UPI0004EED2AF | UniProt:A0A078JV26 | MapMan:3.13.6.1 | : | : |
Description
BnaCnng72830DBnaCnng72830D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JV26]
Coordinates
chrLK045741:+:267..2102
Molecular Weight (calculated)
48993.6 Da
IEP (calculated)
7.578
GRAVY (calculated)
-0.525
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: VILHKGEVGH VYNIGTKKER RVNDVARDVC KLFGMDPEAS IKFVENRPFN DQRYFLDDEK LKKLGWSERT TWEEGLKKTM EWYTQNPEWW GDVSGALLPH
101: PRMLMMPGGR HFDGSDEISS AASASDKPSQ SHMVVPSARS TPQKPSLKFL IYGKTGWIGG LLGKLCEKQG IAYEYGKGRL EDRASLLQDV MSVKPTHVFN
201: SAGVTGRPNV DWCESHKTET IRANVAGTLT LADVCREHGL LMMNFATGCI FEYDEKHPEG SGVGFKEEDT PNFTGSFYSK TKAMVEELLK EYDNVCTLRV
301: RMPISSDLNN PRNFITKISR YNKVVNIPNS MTVLDELLPI SIEMAKRNLK GIWNFTNPGV VSHNEILEMY RDYINPEFKW ANFTLEEQAK VIVAPRSNNE
401: MDASKLKKEF PELLSIKESL IKYAFEPNKK T
101: PRMLMMPGGR HFDGSDEISS AASASDKPSQ SHMVVPSARS TPQKPSLKFL IYGKTGWIGG LLGKLCEKQG IAYEYGKGRL EDRASLLQDV MSVKPTHVFN
201: SAGVTGRPNV DWCESHKTET IRANVAGTLT LADVCREHGL LMMNFATGCI FEYDEKHPEG SGVGFKEEDT PNFTGSFYSK TKAMVEELLK EYDNVCTLRV
301: RMPISSDLNN PRNFITKISR YNKVVNIPNS MTVLDELLPI SIEMAKRNLK GIWNFTNPGV VSHNEILEMY RDYINPEFKW ANFTLEEQAK VIVAPRSNNE
401: MDASKLKKEF PELLSIKESL IKYAFEPNKK T
001: MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
Arabidopsis Description
NRS/ERBifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.