Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 99.53 | 99.53 |
| Bra024075.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi, plastid | 98.6 | 98.6 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 97.44 | 97.67 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 97.44 | 97.67 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 97.44 | 97.67 |
| KRH02967 | Soybean | nucleus | 88.14 | 87.94 |
| KRH72376 | Soybean | endoplasmic reticulum, mitochondrion | 87.67 | 87.47 |
| PGSC0003DMT400029181 | Potato | cytosol, golgi, peroxisome | 84.19 | 85.18 |
| Solyc07g006220.1.1 | Tomato | nucleus | 83.49 | 84.47 |
| PGSC0003DMT400020223 | Potato | endoplasmic reticulum | 81.4 | 81.21 |
| GSMUA_Achr4P02040_001 | Banana | endoplasmic reticulum | 75.81 | 80.69 |
| GSMUA_Achr3P04850_001 | Banana | endoplasmic reticulum | 77.44 | 80.43 |
| Solyc12g010540.1.1 | Tomato | endoplasmic reticulum | 80.47 | 80.09 |
| Os02t0791500-01 | Rice | endoplasmic reticulum, golgi, plastid | 81.16 | 79.86 |
| GSMUA_Achr9P13500_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 76.51 | 79.28 |
| EES05940 | Sorghum | endoplasmic reticulum, golgi, plastid | 80.23 | 78.59 |
| HORVU5Hr1G060660.3 | Barley | mitochondrion | 71.63 | 78.37 |
| Zm00001d018350_P001 | Maize | plasma membrane | 80.0 | 78.36 |
| TraesCS6D01G335600.1 | Wheat | plastid | 79.77 | 78.31 |
| TraesCS6A01G353200.1 | Wheat | plastid | 79.77 | 78.31 |
| TraesCS6B01G385900.1 | Wheat | plastid | 79.77 | 78.31 |
| Os06t0187200-01 | Rice | golgi, peroxisome | 55.81 | 77.67 |
| TraesCS7D01G154100.1 | Wheat | golgi | 77.21 | 76.67 |
| GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, golgi | 72.09 | 76.54 |
| Zm00001d045078_P001 | Maize | extracellular, golgi | 73.02 | 76.03 |
| Zm00001d037087_P001 | Maize | endoplasmic reticulum | 77.44 | 75.68 |
| OQU75981 | Sorghum | endoplasmic reticulum | 77.44 | 75.68 |
| TraesCS7B01G056200.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 77.44 | 75.17 |
| TraesCS7A01G152300.1 | Wheat | endoplasmic reticulum | 77.44 | 75.17 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 69.3 | 69.3 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 68.14 | 67.36 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 67.91 | 67.13 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 65.58 | 65.73 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 66.28 | 65.52 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 66.05 | 65.44 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 64.88 | 65.03 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, nucleus | 57.67 | 64.42 |
| CDX77481 | Canola | endoplasmic reticulum | 63.95 | 60.71 |
| GSMUA_Achr7P16250_001 | Banana | cytosol, endoplasmic reticulum, golgi | 72.09 | 60.67 |
| CDX85133 | Canola | endoplasmic reticulum | 63.95 | 60.31 |
| CDX92990 | Canola | endoplasmic reticulum | 63.02 | 59.43 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 63.49 | 59.35 |
| CDY64583 | Canola | endoplasmic reticulum | 63.49 | 59.35 |
| CDY53207 | Canola | endoplasmic reticulum | 62.79 | 59.34 |
| CDY47611 | Canola | golgi | 20.93 | 25.86 |
| CDY47846 | Canola | golgi | 20.47 | 25.66 |
| CDY21065 | Canola | cytosol | 20.93 | 25.64 |
| CDY31278 | Canola | cytosol | 20.93 | 25.64 |
| CDY03506 | Canola | cytosol, golgi | 20.7 | 25.57 |
| CDX86828 | Canola | golgi | 20.47 | 25.36 |
| CDY40862 | Canola | cytosol, golgi | 20.47 | 25.36 |
| CDY08378 | Canola | golgi | 20.23 | 25.22 |
| CDY69000 | Canola | cytosol | 19.53 | 25.07 |
| CDY47346 | Canola | cytosol | 20.0 | 24.5 |
| CDY49193 | Canola | cytosol | 20.0 | 24.5 |
| CDY50431 | Canola | cytosol | 19.53 | 24.14 |
| CDY49498 | Canola | golgi | 21.16 | 22.09 |
| CDY02312 | Canola | mitochondrion | 21.4 | 21.9 |
| CDY49015 | Canola | golgi | 20.93 | 21.84 |
| CDY09555 | Canola | mitochondrion | 21.16 | 21.67 |
| CDX78998 | Canola | mitochondrion | 20.7 | 21.65 |
| CDX82768 | Canola | mitochondrion | 20.7 | 21.65 |
| CDY13102 | Canola | golgi | 20.0 | 20.87 |
| CDY29113 | Canola | golgi | 20.0 | 20.87 |
| CDY52524 | Canola | golgi | 20.47 | 20.75 |
| CDY31644 | Canola | golgi | 20.0 | 20.28 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 18.84 | 18.93 |
| CDY71965 | Canola | cytosol, mitochondrion | 10.23 | 18.49 |
| CDY60264 | Canola | plastid | 20.93 | 14.73 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 20.7 | 13.32 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 20.23 | 13.08 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 20.23 | 13.08 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 19.3 | 12.91 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 20.0 | 12.84 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 20.0 | 12.84 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 19.07 | 12.73 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 19.07 | 12.69 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 19.07 | 12.69 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 20.0 | 12.16 |
| CDY49495 | Canola | cytosol | 2.33 | 10.2 |
| CDX81794 | Canola | plastid | 6.05 | 7.49 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.19 | 5.57 |
| CDY72469 | Canola | cytosol | 1.63 | 5.3 |
| CDY71423 | Canola | cytosol, nucleus | 4.65 | 4.64 |
| CDY45969 | Canola | cytosol | 3.02 | 4.38 |
| CDY45471 | Canola | cytosol | 3.02 | 4.38 |
| CDX98052 | Canola | cytosol | 3.02 | 4.02 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078C5R2 | EnsemblPlants:CDX72242 | ProteinID:CDX72242 |
| ProteinID:CDX72242.1 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016857 |
| GO:GO:0050662 | EnsemblPlantsGene:GSBRNA2T00099706001 | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF01370 | PRINTS:PR01713 |
| PANTHER:PTHR43574 | PANTHER:PTHR43574:SF17 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0004EC6CA5 | SEG:seg |
Description
BnaC07g42640D
Coordinates
chrLK031796:-:210343..211817
Molecular Weight (calculated)
47552.9 Da
IEP (calculated)
10.058
GRAVY (calculated)
-0.186
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSIEDELMF PSTPGKFKID RSNRQLNRCF ASTSTMFLWA LFLIALTASY LSFQSFVDSG SRYLTASWGG IQWEKQVRTS AQIHRSGGIS VLVTGATGFV
101: GSHVSLALRK RGDGVVGLDN FNNYYDPSLK RARMSLLSSR GIFVVEGDLN DGKLLSKLFD VVAFTHVMHL AAQAGVRYAL ENPQSYVHSN IAGLVNLLET
201: CKAANPQPAV VWASSSSVYG LNEKVPFSES DRTDQPASLY AATKKAGEEI THTYNHIYGL AITGLRFFTV YGPWGRPDMA YFSFTRNILQ GKPITIYRGK
301: NRVDLARDFT FIDDIVKGCL GSLDSSGKST GSGGKKRGSA PYRIFNLGNT SPVTVPILVD ILEKHLKVKA KRNFVEMPGN GDVPFTHANI SSARREFGYK
401: PTTDLETGLK KFVRWYLSYY GYNTKAKLVQ
101: GSHVSLALRK RGDGVVGLDN FNNYYDPSLK RARMSLLSSR GIFVVEGDLN DGKLLSKLFD VVAFTHVMHL AAQAGVRYAL ENPQSYVHSN IAGLVNLLET
201: CKAANPQPAV VWASSSSVYG LNEKVPFSES DRTDQPASLY AATKKAGEEI THTYNHIYGL AITGLRFFTV YGPWGRPDMA YFSFTRNILQ GKPITIYRGK
301: NRVDLARDFT FIDDIVKGCL GSLDSSGKST GSGGKKRGSA PYRIFNLGNT SPVTVPILVD ILEKHLKVKA KRNFVEMPGN GDVPFTHANI SSARREFGYK
401: PTTDLETGLK KFVRWYLSYY GYNTKAKLVQ
001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
Arabidopsis Description
GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.