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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 1
  • mitochondrion 1
  • cytosol 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94504 Canola cytosol, endoplasmic reticulum, peroxisome 99.08 98.85
Bra029444.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 98.85 98.62
AT4G12250.1 Thale cress cytosol, endoplasmic reticulum, golgi 94.7 94.27
CDY04398 Canola cytosol, endoplasmic reticulum, golgi 92.17 93.24
CDX97356 Canola cytosol, endoplasmic reticulum, golgi 92.17 93.24
VIT_02s0241g00180.t01 Wine grape cytosol, plastid 41.71 76.69
KRH57292 Soybean endoplasmic reticulum, golgi, mitochondrion, plastid 73.96 74.83
KRH04016 Soybean endoplasmic reticulum, golgi, mitochondrion, plastid 73.96 74.65
VIT_00s2240g00010.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 66.13 73.97
CDY63064 Canola cytosol, endoplasmic reticulum, golgi, plastid 73.27 73.95
VIT_00s1525g00010.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 73.5 73.33
CDY67756 Canola cytosol, endoplasmic reticulum, golgi, plastid 72.35 72.18
CDX95646 Canola cytosol, endoplasmic reticulum, golgi, plastid 72.12 71.95
PGSC0003DMT400010106 Potato cytosol, endoplasmic reticulum, golgi, plastid 73.27 71.3
Solyc08g079440.1.1 Tomato nucleus 73.04 71.24
GSMUA_Achr4P17900_001 Banana endoplasmic reticulum, mitochondrion, peroxisome 66.36 66.98
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 65.44 66.2
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 65.44 66.2
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 65.44 66.05
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 65.21 65.81
GSMUA_Achr5P18760_001 Banana endoplasmic reticulum, golgi, mitochondrion 68.43 64.71
CDX77481 Canola endoplasmic reticulum 65.44 62.69
CDX85133 Canola endoplasmic reticulum 65.44 62.28
CDY53207 Canola endoplasmic reticulum 65.21 62.2
CDX92990 Canola endoplasmic reticulum 65.21 62.06
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 65.44 61.74
CDY64583 Canola endoplasmic reticulum 65.44 61.74
Os03t0249500-01 Rice plastid 66.36 59.5
TraesCS4A01G080300.1 Wheat plastid 65.21 59.2
TraesCS4D01G224000.1 Wheat plastid 65.44 58.92
EER95171 Sorghum plastid 64.98 58.75
Zm00001d028427_P001 Maize plastid 64.52 58.46
Zm00001d047915_P001 Maize plastid 64.52 58.46
TraesCS4B01G223700.1 Wheat plastid 65.44 57.84
HORVU4Hr1G063010.1 Barley peroxisome 65.21 55.06
CDY31278 Canola cytosol 21.66 26.78
CDY21065 Canola cytosol 21.66 26.78
CDY47611 Canola golgi 21.43 26.72
CDY69000 Canola cytosol 20.51 26.57
CDY47346 Canola cytosol 21.43 26.5
CDY49193 Canola cytosol 21.43 26.5
CDY03506 Canola cytosol, golgi 21.2 26.44
CDY40862 Canola cytosol, golgi 20.74 25.94
CDX86828 Canola golgi 20.74 25.94
CDY08378 Canola golgi 19.82 24.93
CDY47846 Canola golgi 19.59 24.78
CDY50431 Canola cytosol 19.82 24.71
CDX82768 Canola mitochondrion 21.66 22.87
CDX78998 Canola mitochondrion 21.66 22.87
CDY49498 Canola golgi 21.66 22.82
CDY09555 Canola mitochondrion 21.66 22.38
CDY02312 Canola mitochondrion 21.66 22.38
CDY49015 Canola golgi 21.2 22.33
CDY29113 Canola golgi 20.97 22.09
CDY13102 Canola golgi 20.97 22.09
CDY31644 Canola golgi 21.43 21.93
CDY52524 Canola golgi 21.43 21.93
CDY71965 Canola cytosol, mitochondrion 11.06 20.17
CDY25850 Canola cytosol, mitochondrion, peroxisome 19.82 20.09
CDY60264 Canola plastid 21.66 15.38
CDY35137 Canola cytosol, mitochondrion, plastid 22.12 14.33
CDY40003 Canola cytosol, mitochondrion, plastid 22.12 14.33
CDY49495 Canola cytosol 3.23 14.29
CDY60210 Canola cytosol, mitochondrion, peroxisome 21.89 14.22
CDY24092 Canola cytosol, mitochondrion, peroxisome 21.66 14.14
CDY45116 Canola cytosol, mitochondrion, peroxisome 21.66 14.14
CDX98494 Canola cytosol, mitochondrion, plastid 20.74 13.93
CDX97601 Canola cytosol, mitochondrion, plastid 20.74 13.93
CDY32340 Canola cytosol, mitochondrion, peroxisome 20.51 13.84
CDY20084 Canola cytosol, mitochondrion, peroxisome 20.51 13.82
CDX88455 Canola cytosol, peroxisome, plastid 22.12 13.58
CDX81794 Canola plastid 6.45 8.07
CDY71423 Canola cytosol, nucleus 6.22 6.26
CDY72469 Canola cytosol 1.84 6.06
CDY57072 Canola cytosol, extracellular, peroxisome 3.92 5.26
CDY45471 Canola cytosol 3.23 4.71
CDY45969 Canola cytosol 3.23 4.71
CDX98052 Canola cytosol 3.0 4.02
Protein Annotations
MapMan:3.13.4.1Gene3D:3.40.50.720Gene3D:3.90.25.10GO:A0A078DBT0EnsemblPlants:CDX86716ProteinID:CDX86716
ProteinID:CDX86716.1InterPro:Epimerase_deHydtaseGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016857GO:GO:0050662EnsemblPlantsGene:GSBRNA2T00145415001InterPro:NAD(P)-bd_dom_sf
InterPro:Nuc_sugar_epimPFAM:PF01370PRINTS:PR01713PANTHER:PTHR43574PANTHER:PTHR43574:SF21SUPFAM:SSF51735
TMHMM:TMhelixUniParc:UPI0004EEE26CSEG:seg:::
Description
BnaA09g21060D
Coordinates
chrLK031847:+:104800..106399
Molecular Weight (calculated)
47967.1 Da
IEP (calculated)
10.439
GRAVY (calculated)
-0.228
Length
434 amino acids
Sequence
(BLAST)
001: MSHLDDLPST PGKYKTDKAL PYGILHHHRY LRLSKPTLWA SLFLALFLFY LLLSPPPTPS RRSLNDSSLS SAAKYGGSQW EKQVRKSAHP RSRGGLTVLV
101: TGAAGFVGTH VSIALRRRGD GVLGLDNFNR YYDPKLKRAR QGLLERSGVF VVEGDINDAV LLKKLYDVVL FTHVMHLAAQ AGVRYAMQNP GSYVSSNIAG
201: FVNLLEVSKA ANPQPAVVWA SSSSVYGLNK KVPFSEKDRT DHPASLYAAT KKAGEGIAHT YNHIYGLSLT GLRFFTVYGP WGRPDMAYFF FTKDILKGKT
301: ITVFESPDKG SVARDFTYID DIVKGCLGAL DTAEKSTGSG GKKKGPAMFR IYNLGNTSPV PVTKLVKILE KLLKMKAKKK VMPLPRNGDV EFTHANITLA
401: QSEIGYKPAV DLETGLKKFV KWYMGFYSKK KSSW
Best Arabidopsis Sequence Match ( AT4G12250.1 )
(BLAST)
001: MSHLDDLPST PGKYKTDKVP PYGILHHHRY LRLSKLTLWA SLFLALFLFY LVLSPPPSPS RRNLNDSSSI SAAKYGGSHW EKQVRKSARP RSHGGLTVLV
101: TGASGFVGTH VSIALRRRGD GVLGLDNFNR YYDPKLKRAR QGLLERSGVF VVEGDINDAV LLRKLFDVVL FTHVMHLAAQ AGVRYAMQNP GSYVNSNIAG
201: FVNLLEVSKS ANPQPAIVWA SSSSVYGLNS KVPFSEKDRT DQPASLYAAT KKAGEGIAHT YNHIYGLSLT GLRFFTVYGP WGRPDMAYFF FTKDILKGKT
301: ITVFESPDKG SVARDFTYID DIVKGCLGAL DTAEKSTGSG GKKKGPAMFR IYNLGNTSPV PVTKLVTILE KLLKMKAKKK IMPLPRNGDV EFTHANITLA
401: QAELGYKPAV DLETGLKKFV KWYMGFYTGS KKKSSW
Arabidopsis Description
GAE5GAE5 [Source:UniProtKB/TrEMBL;Acc:A0A178UUD1]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.