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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026009.1-P Field mustard cytosol, mitochondrion, plastid 99.55 99.26
CDY40003 Canola cytosol, mitochondrion, plastid 98.96 98.96
CDY71423 Canola cytosol, nucleus 57.61 89.56
CDX88455 Canola cytosol, peroxisome, plastid 91.64 86.85
CDX97601 Canola cytosol, mitochondrion, plastid 83.28 86.38
CDX98494 Canola cytosol, mitochondrion, plastid 83.13 86.22
GSMUA_Achr4P10430_001 Banana cytosol, extracellular, mitochondrion 83.43 86.13
CDY45116 Canola cytosol, mitochondrion, peroxisome 84.78 85.41
CDY20084 Canola cytosol, mitochondrion, peroxisome 81.94 85.25
CDY24092 Canola cytosol, mitochondrion, peroxisome 84.48 85.11
CDY32340 Canola cytosol, mitochondrion, peroxisome 81.64 85.07
CDY60210 Canola cytosol, mitochondrion, peroxisome 84.63 84.88
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 80.3 84.59
CDY25850 Canola cytosol, mitochondrion, peroxisome 54.03 84.58
GSMUA_Achr3P31810_001 Banana cytosol, mitochondrion, peroxisome 77.31 83.41
TraesCS4A01G099200.1 Wheat cytosol 82.99 82.37
Zm00001d047796_P003 Maize extracellular, nucleus, plasma membrane 82.54 82.29
EER95086 Sorghum cytosol, mitochondrion, plastid 82.09 81.85
Os03t0278200-01 Rice nucleus, plasma membrane 82.39 81.78
EER95078 Sorghum cytosol, mitochondrion, peroxisome 81.79 81.55
TraesCS4D01G206000.1 Wheat mitochondrion 82.99 81.52
TraesCS4B01G205100.3 Wheat mitochondrion 82.84 81.38
Zm00001d028654_P002 Maize cytosol 80.9 80.65
CDY45969 Canola cytosol 35.67 80.47
CDY45471 Canola cytosol 35.52 80.13
VIT_04s0069g00830.t01 Wine grape cytosol, mitochondrion, plastid 77.16 78.69
Solyc08g069110.2.1 Tomato unclear 76.27 78.49
PGSC0003DMT400075973 Potato cytosol, mitochondrion, peroxisome 76.42 78.29
HORVU4Hr1G059120.2 Barley plastid 82.69 76.63
KRH16155 Soybean cytosol 74.78 76.49
KRH04933 Soybean cytosol, mitochondrion, plastid 73.43 76.4
GSMUA_Achr3P31820_001 Banana cytosol, mitochondrion, plastid 68.66 76.03
CDY57072 Canola cytosol, extracellular, peroxisome 35.37 73.37
CDX98052 Canola cytosol 35.22 73.06
CDX81794 Canola plastid 36.57 70.61
CDY72469 Canola cytosol 12.39 62.88
CDY47846 Canola golgi 13.88 27.11
CDY08378 Canola golgi 13.73 26.67
CDY71965 Canola cytosol, mitochondrion 9.1 25.63
CDY50431 Canola cytosol 13.28 25.57
CDY47611 Canola golgi 13.13 25.29
CDY03506 Canola cytosol, golgi 13.13 25.29
CDY40862 Canola cytosol, golgi 12.99 25.07
CDX86828 Canola golgi 12.99 25.07
CDY31278 Canola cytosol 13.13 25.07
CDY21065 Canola cytosol 13.13 25.07
CDY47346 Canola cytosol 12.99 24.79
CDY49193 Canola cytosol 12.99 24.79
CDY69000 Canola cytosol 12.24 24.48
CDX86716 Canola cytosol, endoplasmic reticulum, peroxisome 14.33 22.12
CDX94504 Canola cytosol, endoplasmic reticulum, peroxisome 14.33 22.07
CDX97356 Canola cytosol, endoplasmic reticulum, golgi 14.03 21.91
CDY04398 Canola cytosol, endoplasmic reticulum, golgi 14.03 21.91
CDX78998 Canola mitochondrion 13.43 21.9
CDX82768 Canola mitochondrion 13.28 21.65
CDY67756 Canola cytosol, endoplasmic reticulum, golgi, plastid 14.03 21.61
CDY63064 Canola cytosol, endoplasmic reticulum, golgi, plastid 13.73 21.4
CDX95646 Canola cytosol, endoplasmic reticulum, golgi, plastid 13.88 21.38
CDY02312 Canola mitochondrion 13.28 21.19
CDY09555 Canola mitochondrion 13.28 21.19
CDY49015 Canola golgi 12.69 20.63
CDY49498 Canola golgi 12.69 20.63
CDY52524 Canola golgi 12.99 20.52
CDY29113 Canola golgi 12.54 20.39
CDY13102 Canola golgi 12.54 20.39
CDY31644 Canola golgi 12.84 20.28
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 12.99 20.28
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 12.99 20.28
CDX77481 Canola endoplasmic reticulum 13.58 20.09
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 12.84 20.0
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 12.84 20.0
CDX92990 Canola endoplasmic reticulum 13.58 19.96
CDX85133 Canola endoplasmic reticulum 13.58 19.96
CDY53207 Canola endoplasmic reticulum 13.43 19.78
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 13.43 19.57
CDY64583 Canola endoplasmic reticulum 13.43 19.57
CDY49495 Canola cytosol 2.39 16.33
CDY60264 Canola plastid 13.58 14.89
Protein Annotations
EnsemblPlants:CDY35137EnsemblPlantsGene:GSBRNA2T00058022001Gene3D:3.40.50.720Gene3D:3.90.25.10InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sf
InterPro:RmlD-like-bdPANTHER:PTHR43000PANTHER:PTHR43000:SF8PFAM:PF04321PFAM:PF16363ProteinID:CDY35137
ProteinID:CDY35137.1SUPFAM:SSF51735UniParc:UPI0004EF3424UniProt:A0A078HBK9MapMan:3.13.6.1:
Description
BnaA06g11470DBnaA06g11470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBK9]
Coordinates
chrLK032346:-:395885..398573
Molecular Weight (calculated)
75287.7 Da
IEP (calculated)
6.659
GRAVY (calculated)
-0.339
Length
670 amino acids
Sequence
(BLAST)
001: MASSYTPKNI LITGAAGFIA SHVANRLIRT YPDYKIVVLD KLDYCSNLKN LNPSKHSPNF KFVKGDIASA DLVNYLLITE RIDTIMHFAA QTHVDNSFGN
101: SFEFTKNNIY GTHVLLEACK VTGQIRRFIH VSTDEVYGET DEDAVVGNHE ASQLLPTNPY SATKAGAEML VMAYGRSYGL PVITTRGNNV YGPNQFPEKL
201: IPKFMLLAMR GKVLPIHGDG SNVRSYLYCE DVAEAFEVIL HKGEVGHVYN IGTKKERRVN DVAQDICKLF NVDPEANIKF VENRPFNDQR YFLDDEKLKI
301: LGWSERTTWE EGLKKTMEWY TQNPDWWGDV SGALLPHPRM LVMPGGRHFD GSEENSGAVA LSGNSSQSQM VVPTPRSSGS TQNPSLKFLI YGKTGWIGGL
401: LGQICEKQGI AFEYGKGRLE DRSSLLQDIL TVKPTHVFNA AGVTGRPNVD WCESHKTETI RANVAGTLTL ADVCREHSLL LMNFATGCIF EYDENHPLGS
501: GIGFKEEDTP NFTGSFYSKT KAMVEELLKE FDNVCTLRVR MPISSDLNNP RNFITKISRY SKVVNIPNSM TVLDELLPIS IEMAKRNLKG IWNFTNPGVV
601: SHNEVLEMYR DYIDSDFKWA NFTLEEQAKV IVAPRSNNEL DASKLKKEFP ELLSIKESLI KYAFEPNKRT
Best Arabidopsis Sequence Match ( AT1G78570.1 )
(BLAST)
001: MASYTPKNIL ITGAAGFIAS HVANRLIRSY PDYKIVVLDK LDYCSNLKNL NPSKHSPNFK FVKGDIASAD LVNHLLITEG IDTIMHFAAQ THVDNSFGNS
101: FEFTKNNIYG THVLLEACKV TGQIRRFIHV STDEVYGETD EDALVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP VITTRGNNVY GPNQFPEKLI
201: PKFILLAMRG QVLPIHGDGS NVRSYLYCED VAEAFEVVLH KGEVGHVYNI GTKKERRVND VAKDICKLFN MDPEANIKFV DNRPFNDQRY FLDDQKLKKL
301: GWSERTTWEE GLKKTMDWYT QNPEWWGDVS GALLPHPRML MMPGGRHFDG SEDNSLAATL SEKPSQTHMV VPSQRSNGTP QKPSLKFLIY GKTGWIGGLL
401: GKICDKQGIA YEYGKGRLED RSSLLQDIQS VKPTHVFNSA GVTGRPNVDW CESHKTETIR ANVAGTLTLA DVCREHGLLM MNFATGCIFE YDDKHPEGSG
501: IGFKEEDTPN FTGSFYSKTK AMVEELLKEY DNVCTLRVRM PISSDLNNPR NFITKISRYN KVVNIPNSMT VLDELLPISI EMAKRNLKGI WNFTNPGVVS
601: HNEILEMYRD YINPEFKWAN FTLEEQAKVI VAPRSNNEMD ASKLKKEFPE LLSIKESLIK YAYGPNKKT
Arabidopsis Description
RHM1Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM5]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.