Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 2
- golgi 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G23820.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT3G23820.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028348.1-P | Field mustard | endoplasmic reticulum, golgi, nucleus | 99.78 | 99.78 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 99.57 | 99.57 |
| CDX77481 | Canola | endoplasmic reticulum | 94.78 | 96.25 |
| CDX85133 | Canola | endoplasmic reticulum | 94.57 | 95.39 |
| CDX92990 | Canola | endoplasmic reticulum | 94.57 | 95.39 |
| CDY53207 | Canola | endoplasmic reticulum | 94.13 | 95.16 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 94.78 | 94.78 |
| VIT_05s0029g00420.t01 | Wine grape | endoplasmic reticulum | 78.04 | 79.6 |
| PGSC0003DMT400053071 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 75.0 | 77.01 |
| KRH58854 | Soybean | endoplasmic reticulum, golgi | 69.35 | 76.68 |
| Solyc09g092330.1.1 | Tomato | nucleus | 75.0 | 76.33 |
| KRH31569 | Soybean | mitochondrion | 76.3 | 75.97 |
| KRG97348 | Soybean | endoplasmic reticulum | 71.96 | 75.4 |
| PGSC0003DMT400011867 | Potato | cytosol, endoplasmic reticulum, golgi | 73.7 | 74.67 |
| PGSC0003DMT400040718 | Potato | cytosol, endoplasmic reticulum, golgi | 69.13 | 73.27 |
| Solyc05g053790.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 66.96 | 71.13 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 65.65 | 68.17 |
| GSMUA_Achr8P00950_001 | Banana | cytosol, endoplasmic reticulum, golgi | 65.43 | 67.95 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 63.48 | 67.13 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 63.26 | 66.9 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 62.39 | 66.74 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 61.74 | 66.2 |
| GSMUA_Achr8P08790_001 | Banana | endoplasmic reticulum, nucleus, peroxisome | 63.7 | 65.99 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 61.3 | 65.73 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 61.74 | 65.44 |
| KRH42756 | Soybean | extracellular, golgi, plastid | 70.0 | 65.31 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 61.74 | 65.29 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 60.0 | 64.34 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 60.0 | 64.34 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 59.35 | 63.49 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 59.13 | 63.26 |
| GSMUA_Achr7P02740_001 | Banana | endoplasmic reticulum | 65.87 | 62.47 |
| Zm00001d049804_P001 | Maize | plasma membrane | 59.57 | 61.16 |
| Os08t0526100-01 | Rice | plastid | 62.39 | 60.04 |
| Zm00001d021026_P001 | Maize | endoplasmic reticulum | 63.26 | 59.75 |
| TraesCS5B01G280700.1 | Wheat | endoplasmic reticulum | 61.74 | 59.41 |
| EER99141 | Sorghum | cytosol, endoplasmic reticulum, golgi, plastid | 63.7 | 59.31 |
| EES14210 | Sorghum | cytosol, extracellular, golgi, plastid | 61.74 | 59.29 |
| TraesCS5D01G288700.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 61.52 | 58.84 |
| Os09t0504000-01 | Rice | cytosol, endoplasmic reticulum, golgi | 63.48 | 58.63 |
| TraesCS5A01G281600.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 61.3 | 58.51 |
| Zm00001d031577_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome, plastid | 57.17 | 58.44 |
| TraesCS7A01G256600.1 | Wheat | plastid | 62.17 | 58.37 |
| TraesCS7B01G153900.1 | Wheat | plastid | 62.39 | 58.33 |
| TraesCS7D01G257800.1 | Wheat | plastid | 61.96 | 58.16 |
| HORVU7Hr1G053260.2 | Barley | plastid | 61.52 | 57.76 |
| HORVU5Hr1G075660.1 | Barley | plastid | 61.74 | 55.91 |
| CDX86828 | Canola | golgi | 20.65 | 27.38 |
| CDY40862 | Canola | cytosol, golgi | 20.65 | 27.38 |
| CDY21065 | Canola | cytosol | 20.87 | 27.35 |
| CDY31278 | Canola | cytosol | 20.87 | 27.35 |
| CDY47611 | Canola | golgi | 20.65 | 27.3 |
| CDY47846 | Canola | golgi | 20.22 | 27.11 |
| CDY49193 | Canola | cytosol | 20.65 | 27.07 |
| CDY47346 | Canola | cytosol | 20.65 | 27.07 |
| CDY03506 | Canola | cytosol, golgi | 20.43 | 27.01 |
| CDY08378 | Canola | golgi | 20.22 | 26.96 |
| CDY69000 | Canola | cytosol | 19.57 | 26.87 |
| CDY50431 | Canola | cytosol | 19.35 | 25.57 |
| CDY09555 | Canola | mitochondrion | 21.52 | 23.57 |
| CDY02312 | Canola | mitochondrion | 21.09 | 23.1 |
| CDY29113 | Canola | golgi | 20.65 | 23.06 |
| CDY49498 | Canola | golgi | 20.22 | 22.57 |
| CDY49015 | Canola | golgi | 20.0 | 22.33 |
| CDY13102 | Canola | golgi | 20.0 | 22.33 |
| CDX82768 | Canola | mitochondrion | 19.78 | 22.14 |
| CDX78998 | Canola | mitochondrion | 19.78 | 22.14 |
| CDY31644 | Canola | golgi | 19.57 | 21.23 |
| CDY52524 | Canola | golgi | 19.57 | 21.23 |
| CDY71965 | Canola | cytosol, mitochondrion | 10.22 | 19.75 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 17.83 | 19.16 |
| CDY60264 | Canola | plastid | 21.74 | 16.37 |
| CDY49495 | Canola | cytosol | 3.04 | 14.29 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 20.22 | 13.92 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 19.35 | 13.84 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 20.0 | 13.83 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 20.0 | 13.83 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 19.13 | 13.66 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 19.13 | 13.62 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 19.13 | 13.62 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 19.57 | 13.43 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 19.57 | 13.43 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 19.78 | 12.87 |
| CDX81794 | Canola | plastid | 5.65 | 7.49 |
| CDY72469 | Canola | cytosol | 1.74 | 6.06 |
| CDY71423 | Canola | cytosol, nucleus | 5.65 | 6.03 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.13 | 5.88 |
| CDX98052 | Canola | cytosol | 3.48 | 4.95 |
| CDY45969 | Canola | cytosol | 3.04 | 4.71 |
| CDY45471 | Canola | cytosol | 3.04 | 4.71 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078JAJ7 | UniProt:A0A078JAJ7 | EnsemblPlants:CDY64583 |
| ProteinID:CDY64583 | ProteinID:CDY64583.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016857 | EnsemblPlantsGene:GSBRNA2T00042377001 |
| InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF16363 | PRINTS:PR01713 | PANTHER:PTHR43574 |
| PANTHER:PTHR43574:SF10 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0004EF4AB9 | SEG:seg | : |
Description
BnaCnng44170DBnaCnng44170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAJ7]
Coordinates
chrLK034490:+:3006..4900
Molecular Weight (calculated)
50598.4 Da
IEP (calculated)
10.092
GRAVY (calculated)
-0.255
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSASSADT SKTVKLERYN NYLRKIHSTK VLKASSKVLF RATLLVALVL VLVFAINYHP LSDSHSAASH HLHRRSFLST GIFSSSSSSL GEGAAWEKRV
101: RQSSTPKRPH GLSVLVTGAA GFVGSHCSIA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKNQVFIVEG DLNDGPLLRK LFDVVPFTHV LHLAAQAGVR
201: YAMKNPQSYI SSNIAGLVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKA ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GPAQLRVYNL GNTSPVPVGR LVSILEGLLG SKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK RENSHADDSA
101: RQSSTPKRPH GLSVLVTGAA GFVGSHCSIA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKNQVFIVEG DLNDGPLLRK LFDVVPFTHV LHLAAQAGVR
201: YAMKNPQSYI SSNIAGLVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKA ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GPAQLRVYNL GNTSPVPVGR LVSILEGLLG SKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK RENSHADDSA
001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LNASSKVLFR ATLLVALVLV LIFAINYPPL SDSRAAAAHH LHRRSFLSTG LFSSSSSSSS IGGAAWEKRV
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA
Arabidopsis Description
GAE6UDP-glucuronate 4-epimerase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIS3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.