Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G23920.1 | CDY69000 | AT1G12780.1 | 21798944 |
| AT4G23920.1 | CDX86828 | AT4G10960.1 | 21798944 |
| AT4G23920.1 | CDY40862 | AT4G10960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013744.1-P | Field mustard | cytosol, golgi | 99.43 | 99.43 |
| CDY03506 | Canola | cytosol, golgi | 98.56 | 98.56 |
| AT4G23920.1 | Thale cress | cytosol | 93.97 | 93.43 |
| CDY50431 | Canola | cytosol | 91.95 | 91.95 |
| CDY40862 | Canola | cytosol, golgi | 85.92 | 86.17 |
| CDX86828 | Canola | golgi | 85.92 | 86.17 |
| Solyc12g055930.1.1 | Tomato | cytosol, extracellular, golgi | 79.02 | 79.02 |
| PGSC0003DMT400012829 | Potato | cytosol, extracellular, golgi | 78.74 | 78.74 |
| CDY47846 | Canola | golgi | 77.59 | 78.72 |
| CDY08378 | Canola | golgi | 77.59 | 78.26 |
| GSMUA_Achr5P09200_001 | Banana | golgi | 77.87 | 76.34 |
| GSMUA_Achr6P22620_001 | Banana | golgi, mitochondrion | 76.44 | 76.22 |
| GSMUA_Achr9P00170_001 | Banana | extracellular, golgi | 76.15 | 75.93 |
| GSMUA_Achr4P02670_001 | Banana | golgi | 75.86 | 75.64 |
| Os09t0323000-01 | Rice | cytosol | 72.13 | 68.02 |
| EER98731 | Sorghum | plastid | 70.98 | 67.49 |
| TraesCS5A01G183100.1 | Wheat | plastid | 72.7 | 67.47 |
| TraesCS5B01G181300.1 | Wheat | plastid | 72.7 | 67.47 |
| TraesCS5D01G188200.1 | Wheat | plastid | 72.7 | 67.47 |
| HORVU5Hr1G055920.8 | Barley | plastid | 72.13 | 67.11 |
| CDY69000 | Canola | cytosol | 64.08 | 66.57 |
| Zm00001d005598_P001 | Maize | plastid | 69.54 | 66.3 |
| CDY31278 | Canola | cytosol | 66.38 | 65.81 |
| CDY21065 | Canola | cytosol | 66.09 | 65.53 |
| CDY47346 | Canola | cytosol | 64.94 | 64.39 |
| CDY49193 | Canola | cytosol | 64.94 | 64.39 |
| Zm00001d020093_P002 | Maize | golgi | 55.17 | 63.58 |
| GSMUA_Achr8P27530_001 | Banana | cytosol, golgi, plastid | 77.01 | 63.21 |
| Os08t0374800-01 | Rice | golgi | 72.7 | 62.01 |
| GSMUA_Achr3P16370_001 | Banana | golgi, mitochondrion, plastid | 75.57 | 60.74 |
| Zm00001d032346_P002 | Maize | endoplasmic reticulum, golgi, plastid | 73.28 | 60.28 |
| EES14924 | Sorghum | endoplasmic reticulum, golgi, plastid | 73.28 | 60.28 |
| CDY49495 | Canola | cytosol | 14.66 | 52.04 |
| GSMUA_Achr9P06140_001 | Banana | plastid | 76.15 | 50.86 |
| GSMUA_Achr6P26620_001 | Banana | plastid | 75.29 | 48.79 |
| CDY71965 | Canola | cytosol, mitochondrion | 26.44 | 38.66 |
| CDY60264 | Canola | plastid | 66.38 | 37.81 |
| CDY49498 | Canola | golgi | 42.82 | 36.16 |
| CDY49015 | Canola | golgi | 42.24 | 35.68 |
| CDX78998 | Canola | mitochondrion | 41.95 | 35.52 |
| CDX82768 | Canola | mitochondrion | 41.95 | 35.52 |
| CDY09555 | Canola | mitochondrion | 42.82 | 35.48 |
| CDY13102 | Canola | golgi | 41.95 | 35.44 |
| CDY29113 | Canola | golgi | 41.95 | 35.44 |
| CDY02312 | Canola | mitochondrion | 42.53 | 35.24 |
| CDY31644 | Canola | golgi | 42.82 | 35.14 |
| CDY52524 | Canola | golgi | 42.53 | 34.91 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 27.3 | 22.14 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 27.3 | 21.84 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 26.72 | 21.68 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 26.72 | 21.63 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 26.72 | 21.43 |
| CDY53207 | Canola | endoplasmic reticulum | 27.59 | 21.1 |
| CDX92990 | Canola | endoplasmic reticulum | 27.59 | 21.05 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.86 | 20.98 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.86 | 20.98 |
| CDX77481 | Canola | endoplasmic reticulum | 27.3 | 20.97 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.86 | 20.93 |
| CDX85133 | Canola | endoplasmic reticulum | 27.3 | 20.83 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.57 | 20.7 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.86 | 20.69 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.86 | 20.69 |
| CDY64583 | Canola | endoplasmic reticulum | 27.3 | 20.65 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 27.3 | 20.65 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 22.7 | 18.46 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 25.29 | 13.13 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 25.29 | 13.13 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 24.14 | 12.63 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 24.14 | 12.63 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 25.57 | 12.59 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 24.14 | 12.57 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 22.99 | 12.44 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 22.99 | 12.42 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 22.99 | 12.38 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 22.99 | 12.38 |
| CDX81794 | Canola | plastid | 6.61 | 6.63 |
| CDY71423 | Canola | cytosol, nucleus | 6.61 | 5.34 |
| CDY45969 | Canola | cytosol | 3.74 | 4.38 |
| CDY45471 | Canola | cytosol | 3.74 | 4.38 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.02 | 4.33 |
| CDY72469 | Canola | cytosol | 1.44 | 3.79 |
| CDX98052 | Canola | cytosol | 3.45 | 3.72 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | MapMan:3.13.8 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078ICM7 |
| UniProt:A0A078ICM7 | EnsemblPlants:CDY47611 | ProteinID:CDY47611 | ProteinID:CDY47611.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003978 | GO:GO:0005975 | GO:GO:0006012 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016853 |
| EnsemblPlantsGene:GSBRNA2T00087819001 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PFAM:PF16363 | PANTHER:PTHR43725 | PANTHER:PTHR43725:SF11 |
| MetaCyc:PWY-3821 | MetaCyc:PWY-6317 | MetaCyc:PWY-6397 | MetaCyc:PWY-6527 | MetaCyc:PWY-7328 | MetaCyc:PWY-7344 |
| SUPFAM:SSF51735 | TIGRFAMs:TIGR01179 | InterPro:UDP_G4E | UniPathway:UPA00214 | UniParc:UPI0004EEE3B7 | SEG:seg |
Description
BnaA01g13540DBnaA01g13540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICM7]
Coordinates
chrLK032726:-:31403..34096
Molecular Weight (calculated)
38335.6 Da
IEP (calculated)
6.602
GRAVY (calculated)
-0.211
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKNVLVTGG AGYIGSHTVL QLLDGGYSVV VVDNHDNSSV IALQRVKKLA GDNGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNLFGTV ILLEVMSQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DPEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYNTKD GTGVRDYIHV IDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVLAGRRPGD
301: AEIVYASTEK AERELNWKAK YGIEDMCRDL WNWASNNPYG YASSNGSS
101: YYNNNLFGTV ILLEVMSQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DPEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYNTKD GTGVRDYIHV IDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVLAGRRPGD
301: AEIVYASTEK AERELNWKAK YGIEDMCRDL WNWASNNPYG YASSNGSS
001: MAKSVLVTGG AGYIGSHTVL QLLEGGYSAV VVDNYDNSSA ASLQRVKKLA GENGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS
Arabidopsis Description
UGE2UDP-glucose 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.