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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plastid
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:golgi
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr1P18740_001
GSMUA_Achr3P16370_001
GSMUA_Achr4P02670_001
GSMUA_Achr5P09200_001
GSMUA_Achr5P13620_001
GSMUA_Achr6P22620_001
GSMUA_Achr6P26620_001
GSMUA_Achr8P27530_001
GSMUA_Achr9P00170_001
GSMUA_Achr9P06140_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G23920.1 GSMUA_Achr1P18740_001 AT1G12780.1 21798944
AT4G23920.1 GSMUA_Achr5P13620_001 AT1G12780.1 21798944
AT4G23920.1 GSMUA_Achr3P16370_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr4P02670_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr5P09200_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr6P22620_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr6P26620_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr8P27530_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr9P00170_001 AT4G10960.1 21798944
AT4G23920.1 GSMUA_Achr9P06140_001 AT4G10960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P27530_001 Banana cytosol, golgi, plastid 80.37 82.08
GSMUA_Achr4P02670_001 Banana golgi 64.43 79.94
GSMUA_Achr9P00170_001 Banana extracellular, golgi 64.2 79.66
GSMUA_Achr6P22620_001 Banana golgi, mitochondrion 63.28 78.51
GSMUA_Achr5P09200_001 Banana golgi 64.2 78.31
Bra019257.1-P Field mustard plastid 60.97 75.86
Bra035262.1-P Field mustard golgi 60.74 75.79
CDX86828 Canola golgi 60.74 75.79
CDY40862 Canola cytosol, golgi 60.74 75.79
AT4G10960.1 Thale cress golgi 61.43 75.78
CDY47611 Canola golgi 60.74 75.57
PGSC0003DMT400012829 Potato cytosol, extracellular, golgi 60.74 75.57
Solyc12g055930.1.1 Tomato cytosol, extracellular, golgi 60.51 75.29
Bra013744.1-P Field mustard cytosol, golgi 60.51 75.29
CDY03506 Canola cytosol, golgi 60.51 75.29
AT4G23920.1 Thale cress cytosol 60.28 74.57
CDY50431 Canola cytosol 59.82 74.43
Bra027732.1-P Field mustard golgi 58.2 73.47
CDY47846 Canola golgi 58.2 73.47
AT1G64440.1 Thale cress cytosol, golgi 58.89 73.28
CDY08378 Canola golgi 58.2 73.04
Os09t0323000-01 Rice cytosol 59.35 69.65
EER98731 Sorghum plastid 58.66 69.4
Zm00001d005598_P001 Maize plastid 58.43 69.32
HORVU5Hr1G055920.8 Barley plastid 59.35 68.72
TraesCS5D01G188200.1 Wheat plastid 58.89 68.0
TraesCS5B01G181300.1 Wheat plastid 58.89 68.0
TraesCS5A01G183100.1 Wheat plastid 58.89 68.0
GSMUA_Achr1P18740_001 Banana cytosol 54.97 67.23
GSMUA_Achr5P13620_001 Banana cytosol 53.81 66.38
Zm00001d020093_P002 Maize golgi 45.73 65.56
Os08t0374800-01 Rice golgi 60.05 63.73
Zm00001d032346_P002 Maize endoplasmic reticulum, golgi, plastid 60.51 61.94
EES14924 Sorghum endoplasmic reticulum, golgi, plastid 60.28 61.7
GSMUA_Achr9P06140_001 Banana plastid 70.21 58.35
GSMUA_Achr6P26620_001 Banana plastid 70.44 56.8
GSMUA_Achr11P... Banana cytosol, golgi 34.87 38.62
GSMUA_Achr4P31860_001 Banana mitochondrion 35.33 36.78
GSMUA_Achr8P33320_001 Banana mitochondrion 35.33 36.69
GSMUA_Achr11P... Banana mitochondrion 34.87 36.21
GSMUA_Achr3P23390_001 Banana mitochondrion 34.41 35.73
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, golgi 18.24 19.51
GSMUA_Achr3P04850_001 Banana endoplasmic reticulum 18.48 19.32
GSMUA_Achr4P02040_001 Banana endoplasmic reticulum 17.78 19.06
GSMUA_Achr9P13500_001 Banana cytosol, endoplasmic reticulum, golgi, plastid 17.55 18.31
GSMUA_Achr4P17900_001 Banana endoplasmic reticulum, mitochondrion, peroxisome 18.01 18.14
GSMUA_Achr5P25290_001 Banana mitochondrion 4.85 18.1
GSMUA_Achr5P18760_001 Banana endoplasmic reticulum, golgi, mitochondrion 19.17 18.08
GSMUA_AchrUn_... Banana endoplasmic reticulum 18.24 17.83
GSMUA_Achr8P00950_001 Banana cytosol, endoplasmic reticulum, golgi 18.01 17.61
GSMUA_Achr8P08790_001 Banana endoplasmic reticulum, nucleus, peroxisome 17.55 17.12
GSMUA_Achr7P02740_001 Banana endoplasmic reticulum 18.71 16.7
GSMUA_Achr7P16250_001 Banana cytosol, endoplasmic reticulum, golgi 18.71 15.85
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi, nucleus 13.86 15.58
GSMUA_Achr4P10430_001 Banana cytosol, extracellular, mitochondrion 20.09 13.41
GSMUA_Achr5P04690_001 Banana endoplasmic reticulum, golgi, nucleus 12.7 11.9
GSMUA_Achr3P31810_001 Banana cytosol, mitochondrion, peroxisome 16.63 11.59
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 16.86 11.48
GSMUA_Achr3P31820_001 Banana cytosol, mitochondrion, plastid 15.94 11.4
GSMUA_Achr4P29070_001 Banana cytosol 1.39 9.09
GSMUA_Achr4P02550_001 Banana mitochondrion 7.39 7.02
GSMUA_Achr5P10430_001 Banana cytosol 2.77 3.92
GSMUA_Achr1P03840_001 Banana cytosol 2.54 3.59
GSMUA_Achr4P29060_001 Banana cytosol 1.62 3.2
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.8Gene3D:3.40.50.720Gene3D:3.90.25.10GO:GO:0003674
GO:GO:0003824GO:GO:0003978GO:GO:0005575GO:GO:0005975GO:GO:0006012GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016853EnsemblPlantsGene:GSMUA_Achr3G16370_001EnsemblPlants:GSMUA_Achr3P16370_001
EnsemblPlants:GSMUA_Achr3T16370_001UniProt:M0SF53InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPFAM:PF16363PANTHER:PTHR43725
PANTHER:PTHR43725:SF11SUPFAM:SSF51735TIGRFAMs:TIGR01179TMHMM:TMhelixInterPro:UDP_G4EUniParc:UPI000294A6AC
Description
UDP-glucose 4-epimerase GEPI48 [Source:GMGC_GENE;Acc:GSMUA_Achr3G16370_001]
Coordinates
chr3:-:17669893..17682992
Molecular Weight (calculated)
47976.0 Da
IEP (calculated)
7.400
GRAVY (calculated)
0.078
Length
433 amino acids
Sequence
(BLAST)
001: MPSPPALARN ILVTGGAGYI GSHTVLQLLK GGYRAVVVDN LDNSSEVALE RVRELAGEFG KNLAFHRMIW FPCVLFYSET ILIFSRVVRA NVRLDFRFVP
101: CIFNLLIALF PDCAVSVTGS IFSETYFPVI DLRDREALEK VFSATKFDAV IHFAGIKAVG ESVRKPLLYY NNNLIGTIIL FEVMAAYGCK KLVFSSSATV
201: YGSPKKVPCT EDFPLCAINP YGQTKLMTED ICRDMCQGDS DWDIILLRYF NPVGAHPSGY IGEDPRGVPN NLMPFVQQVA VGRRPALTVF GNDYSTKDGT
301: AVRDYIHVVD LADGHIAALQ KLFEGSHVGC EVYNLATGKG SSVLEIVAAF EKASEKRIPL ILAGRRPGDA EIVYASTAKA EKELHWKAKY SIEEMCRDQW
401: NWVSKNPWGY RLPETTNGNG KLLFQCAVSN LII
Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)
001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L
Arabidopsis Description
UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.