Factsheet for GSMUA_Achr11P18470_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G34850.2	Thale cress	cytosol	50.9	84.32
Solyc07g043550.2.1	Tomato	cytosol, unclear	64.71	83.77
CDY71965	Canola	cytosol, mitochondrion	50.13	82.35
GSMUA_Achr3P23390_001	Banana	mitochondrion	86.19	80.82
GSMUA_Achr11P...	Banana	mitochondrion	86.19	80.82
GSMUA_Achr8P33320_001	Banana	mitochondrion	83.63	78.42
PGSC0003DMT400041159	Potato	golgi, mitochondrion	75.96	76.55
PGSC0003DMT400080637	Potato	golgi	78.26	76.5
GSMUA_Achr4P31860_001	Banana	mitochondrion	80.56	75.72
KRH36892	Soybean	golgi, mitochondrion	79.54	74.94
KRH11871	Soybean	golgi, plastid	79.28	74.7
Solyc12g006410.1.1	Tomato	unclear	75.96	74.44
CDY09555	Canola	mitochondrion	79.8	74.29
KRH43065	Soybean	golgi, mitochondrion, plastid	79.03	74.28
Bra032409.1-P	Field mustard	mitochondrion	79.54	74.22
CDY52524	Canola	golgi	80.31	74.06
CDY02312	Canola	mitochondrion	79.54	74.05
KRH59194	Soybean	golgi, mitochondrion	78.77	74.04
AT1G30620.4	Thale cress	golgi, mitochondrion	79.28	73.99
Solyc02g030230.2.1	Tomato	mitochondrion	78.52	73.8
CDX82768	Canola	mitochondrion	76.98	73.24
AT4G20460.1	Thale cress	golgi, mitochondrion	76.98	73.24
CDX78998	Canola	mitochondrion	76.98	73.24
CDY31644	Canola	golgi	79.28	73.11
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	77.75	72.9
PGSC0003DMT400054459	Potato	mitochondrion	77.49	72.66
CDY13102	Canola	golgi	76.47	72.57
Bra027557.1-P	Field mustard	golgi	76.47	72.57
Bra020917.1-P	Field mustard	golgi, mitochondrion	75.96	72.26
CDY29113	Canola	golgi	75.96	72.09
Bra033746.1-P	Field mustard	golgi	75.7	71.84
CDY49498	Canola	golgi	75.45	71.6
CDY49015	Canola	golgi	75.45	71.6
Bra005387.1-P	Field mustard	golgi, mitochondrion	79.8	68.72
AT5G44480.1	Thale cress	mitochondrion	75.45	67.66
Bra013466.1-P	Field mustard	mitochondrion	75.7	63.93
GSMUA_Achr4P02670_001	Banana	golgi	39.64	44.41
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	38.36	42.98
GSMUA_Achr5P09200_001	Banana	golgi	38.11	41.97
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	37.08	41.55
GSMUA_Achr1P18740_001	Banana	cytosol	35.04	38.7
GSMUA_Achr5P13620_001	Banana	cytosol	34.02	37.89
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	38.62	34.87
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	37.34	34.43
GSMUA_Achr9P06140_001	Banana	plastid	38.11	28.6
GSMUA_Achr6P26620_001	Banana	plastid	38.62	28.12
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	23.53	22.72
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	22.76	21.5
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	22.76	21.45
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	21.74	21.04
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	21.99	20.0
GSMUA_Achr5P25290_001	Banana	mitochondrion	5.88	19.83
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	22.51	19.17
GSMUA_Achr8P08790_001	Banana	endoplasmic reticulum, nucleus, peroxisome	21.48	18.92
GSMUA_Achr8P00950_001	Banana	cytosol, endoplasmic reticulum, golgi	20.72	18.28
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	20.46	18.06
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	23.53	18.0
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	17.65	17.92
GSMUA_Achr7P02740_001	Banana	endoplasmic reticulum	20.97	16.91
GSMUA_Achr4P10430_001	Banana	cytosol, extracellular, mitochondrion	22.25	13.41
GSMUA_Achr5P04690_001	Banana	endoplasmic reticulum, golgi, nucleus	14.32	12.12
GSMUA_Achr3P31810_001	Banana	cytosol, mitochondrion, peroxisome	19.18	12.08
GSMUA_Achr3P31820_001	Banana	cytosol, mitochondrion, plastid	18.16	11.74
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	18.93	11.64
GSMUA_Achr4P02550_001	Banana	mitochondrion	6.39	5.48
GSMUA_Achr5P10430_001	Banana	cytosol	3.58	4.58
GSMUA_Achr4P29070_001	Banana	cytosol	0.77	4.55
GSMUA_Achr4P29060_001	Banana	cytosol	2.3	4.11
GSMUA_Achr1P03840_001	Banana	cytosol	3.07	3.92

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005575	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	EnsemblPlantsGene:GSMUA_Achr11G18470_001	EnsemblPlants:GSMUA_Achr11P18470_001
EnsemblPlants:GSMUA_Achr11T18470_001	UniProt:M0RTC7	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349
PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	TMHMM:TMhelix	InterPro:UDP_G4E	UniParc:UPI00029618CA

Description

Probable UDP-arabinose 4-epimerase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G18470_001]

Coordinates

chr11:+:19850163..19855492

Molecular Weight (calculated)

42974.8 Da

IEP (calculated)

8.611

GRAVY (calculated)

-0.116

Length

391 amino acids

Sequence
(BLAST)

001: MDYSDSRHKP HIIGKVFIAV FLIVLCILIT KKSPDPSGAS LLSLHVPGAT HVLVTGGAGY IGSHAVLRLL KDSYRVTVVD NLSRGNIGAI KILQALFPEP
101: GRLQFIYADL GNARAVNKIF AENTFDAVMH FAAVAYVGES MLEPLRYYHN ITANTLVVLE AMAAHGVKTL IYSSTCATYG EPEKMAITEE TPQVPINPYG
201: KAKKMAEDII LDFSKNSDMA VMILRYFNVI GSDPEGRLGE APRPELREHG RISGACFDAA LGIIPGLKVK GTDYPTRDGT CIRDYIDVTD LVDAHVKALD
301: KAKPRRVGIY NVGTGKGITV KEFVEACKKA TGADIKVEYL SRRPGDYAEV YSDPSKINRE LNWTAHYTDL EKSLSIAWRW QKSHRNGYGS P

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.