Factsheet for GSMUA_Achr5P04690_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, nucleus

Predictor Summary:

nucleus 3
cytosol 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034293_P001	Maize	plastid	22.73	47.51
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	36.8	44.16
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	39.39	43.86
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	38.53	43.0
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	37.01	42.33
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	36.8	41.98
Zm00001d037310_P001	Maize	plastid	23.16	35.2
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	37.23	33.66
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	27.71	29.77
Zm00001d017794_P001	Maize	plastid	23.81	29.49
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	29.22	29.41
Zm00001d038116_P001	Maize	plastid	19.7	28.09
GSMUA_Achr8P00950_001	Banana	cytosol, endoplasmic reticulum, golgi	26.84	27.99
GSMUA_Achr8P08790_001	Banana	endoplasmic reticulum, nucleus, peroxisome	26.19	27.25
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	25.97	27.09
GSMUA_Achr7P02740_001	Banana	endoplasmic reticulum	26.84	25.57
GSMUA_Achr4P02670_001	Banana	golgi	12.77	16.91
GSMUA_Achr1P18740_001	Banana	cytosol	12.55	16.38
GSMUA_Achr5P13620_001	Banana	cytosol	12.12	15.95
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	11.9	15.76
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	11.9	15.76
GSMUA_Achr5P09200_001	Banana	golgi	11.26	14.65
GSMUA_Achr11P...	Banana	cytosol, golgi	12.12	14.32
GSMUA_Achr8P33320_001	Banana	mitochondrion	12.55	13.91
GSMUA_Achr5P25290_001	Banana	mitochondrion	3.46	13.79
GSMUA_Achr3P23390_001	Banana	mitochondrion	12.34	13.67
GSMUA_Achr11P...	Banana	mitochondrion	12.34	13.67
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	12.12	13.21
GSMUA_Achr4P31860_001	Banana	mitochondrion	11.47	12.74
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	11.9	12.7
GSMUA_Achr9P06140_001	Banana	plastid	12.34	10.94
GSMUA_Achr6P26620_001	Banana	plastid	12.12	10.43
GSMUA_Achr3P31810_001	Banana	cytosol, mitochondrion, peroxisome	11.26	8.37
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	11.47	8.33
GSMUA_Achr4P10430_001	Banana	cytosol, extracellular, mitochondrion	11.69	8.32
GSMUA_Achr3P31820_001	Banana	cytosol, mitochondrion, plastid	9.96	7.6
GSMUA_Achr4P29070_001	Banana	cytosol	0.87	6.06
GSMUA_Achr4P02550_001	Banana	mitochondrion	4.11	4.17
GSMUA_Achr4P29060_001	Banana	cytosol	1.95	4.11
GSMUA_Achr5P10430_001	Banana	cytosol	2.38	3.59
GSMUA_Achr1P03840_001	Banana	cytosol	2.38	3.59

Protein Annotations

EnsemblPlants:GSMUA_Achr5P04690_001	EnsemblPlants:GSMUA_Achr5T04690_001	EnsemblPlantsGene:GSMUA_Achr5G04690_001	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0050662	InterPro:Epimerase_deHydtase
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43574	PANTHER:PTHR43574:SF17	PFAM:PF01370	SEG:seg	SUPFAM:SSF51735
TMHMM:TMhelix	UniParc:UPI0002954A6F	UniProt:M0SVP8	MapMan:3.13.4.1	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G04690_001]

Coordinates

chr5:+:3464042..3465911

Molecular Weight (calculated)

52637.5 Da

IEP (calculated)

11.926

GRAVY (calculated)

-0.628

Length

462 amino acids

Sequence
(BLAST)

001: MRLMEDELFP STPGKFKIER AHTINRQFHR CFASTSTMFL WALFLIALTA SYLSFQSFVD TSSRYFNASW GGMHWEKQIR ASATPRRPGG VSVLVTGAAG
101: FVGTHVSLAL RKRGDGVVGL DNFNSYYDPS LKKARKALLT SHGVFVVEGD INDARLLAKL FDVVPFTHAC NLPLRGHEEG RRGDHPHLQP HLRPLHHGAP
201: LLHRLRALGP PRHGLLLLHP QHPPGEAHHR LPRQEPRRPR PRLHLHRRHR QGLRRLPRHR AEEHRERRPE AWPRPVPHLQ PGEHLARDGA GAGGHPRAPP
301: QSQGEAPRGG DAGQRGCALH PRQHQLRSHR ARLQPHHQPR GRPEEVRQVV PLLLRLQPQK WRRSNESIQE LVKTSLFLCS LRCFLSIFLN RCTFHLLVLL
401: FYARHPRRGG WPMDARSGCQ TDTIPDLAAN PPGSNRADRN SSCRSRKISP ESWLFHRVGF VI

Best Arabidopsis Sequence Match ( AT4G30440.1 )
(BLAST)

001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH

Arabidopsis Description

GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.